Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL359999.1-201ENST00000604513 294 ntBASIC1.92□□□□□ -2.1
CDH4P55283 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.92□□□□□ -2.1
CDH4P55283 AL022154.1-201ENST00000604698 785 ntBASIC1.92□□□□□ -2.1
CDH4P55283 AC021646.1-201ENST00000605469 484 ntBASIC1.92□□□□□ -2.1
CDH4P55283 MIR7844-201ENST00000616161 122 ntBASIC1.92□□□□□ -2.1
CDH4P55283 DUXAP9-208ENST00000622815 614 ntBASIC1.92□□□□□ -2.1
CDH4P55283 ZNF702P-202ENST00000434269 1966 ntBASIC1.91□□□□□ -2.1
CDH4P55283 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
CDH4P55283 RNU5E-1-201ENST00000362477 120 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNU5F-7P-201ENST00000363696 115 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNU4-1-201ENST00000363925 141 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
CDH4P55283 MIR186-201ENST00000384988 86 ntBASIC1.91□□□□□ -2.1
CDH4P55283 MIR10A-201ENST00000385043 110 ntBASIC1.91□□□□□ -2.1
CDH4P55283 MRPL42P2-201ENST00000403169 426 ntBASIC1.91□□□□□ -2.1
CDH4P55283 MTCYBP36-201ENST00000404146 440 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
CDH4P55283 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.91□□□□□ -2.1
CDH4P55283 AC007283.2-201ENST00000424739 197 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AC137499.1-201ENST00000427602 88 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AL627311.1-201ENST00000431514 115 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.91□□□□□ -2.1
CDH4P55283 HMGB1P35-201ENST00000503360 598 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AC010587.1-201ENST00000505809 469 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AC005178.1-201ENST00000508392 440 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AC112206.3-201ENST00000514578 389 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNU2-53P-201ENST00000516257 147 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNU2-44P-201ENST00000516795 194 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNU6-295P-201ENST00000516901 104 ntBASIC1.91□□□□□ -2.1
CDH4P55283 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AP004607.1-201ENST00000524456 203 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AP003181.2-201ENST00000528941 181 ntBASIC1.91□□□□□ -2.1
CDH4P55283 ADI1P3-201ENST00000549509 470 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.91□□□□□ -2.1
CDH4P55283 AC093249.1-201ENST00000567049 203 ntBASIC1.91□□□□□ -2.1
CDH4P55283 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.91□□□□□ -2.1
CDH4P55283 AC026271.5-201ENST00000577873 130 ntBASIC1.91□□□□□ -2.1
CDH4P55283 ELOCP5-201ENST00000604924 333 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AC092140.2-201ENST00000618027 521 ntBASIC1.91□□□□□ -2.1
CDH4P55283 U6.42-201ENST00000618440 107 ntBASIC1.91□□□□□ -2.1
CDH4P55283 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDH4P55283 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CDH4P55283 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
CDH4P55283 AC002543.1-201ENST00000299783 1954 ntBASIC1.9□□□□□ -2.1
CDH4P55283 RNU6-1010P-201ENST00000362757 107 ntBASIC1.9□□□□□ -2.11
CDH4P55283 RNU6-72P-201ENST00000384285 79 ntBASIC1.9□□□□□ -2.11
CDH4P55283 RNU6-843P-201ENST00000384454 104 ntBASIC1.9□□□□□ -2.11
CDH4P55283 SNORA40.18-201ENST00000391200 128 ntBASIC1.9□□□□□ -2.11
CDH4P55283 CISD1P1-201ENST00000393907 327 ntBASIC1.9□□□□□ -2.11
CDH4P55283 Y_RNA.608-201ENST00000410647 95 ntBASIC1.9□□□□□ -2.11
CDH4P55283 TOMM20P4-201ENST00000427861 435 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH4P55283 KATNBL1P6-201ENST00000453433 915 ntBASIC1.9□□□□□ -2.11
CDH4P55283 ZNF114P1-201ENST00000453500 292 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH4P55283 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH4P55283 AC116337.1-201ENST00000509680 687 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AC108078.2-201ENST00000510750 236 ntBASIC1.9□□□□□ -2.11
CDH4P55283 RNU6-123P-201ENST00000516163 102 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.9□□□□□ -2.11
CDH4P55283 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AL031775.1-201ENST00000607014 887 ntBASIC1.9□□□□□ -2.11
CDH4P55283 RNU6-87P-201ENST00000607561 108 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
CDH4P55283 MIR6845-201ENST00000613182 61 ntBASIC1.9□□□□□ -2.11
CDH4P55283 uc_338.15-201ENST00000615470 191 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AC131159.1-201ENST00000621854 213 ntBASIC1.9□□□□□ -2.11
CDH4P55283 AC090517.3-201ENST00000625170 141 ntBASIC1.9□□□□□ -2.11
CDH4P55283 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CDH4P55283 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDH4P55283 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH4P55283 RNU6-39P-201ENST00000384344 107 ntBASIC1.89□□□□□ -2.11
CDH4P55283 SNORA26.9-201ENST00000391322 122 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AL512604.1-201ENST00000404812 257 ntBASIC1.89□□□□□ -2.11
CDH4P55283 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH4P55283 AC114491.1-201ENST00000416095 246 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
CDH4P55283 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH4P55283 DNAJC19P4-201ENST00000440115 345 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH4P55283 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH4P55283 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH4P55283 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH4P55283 HMGB3P17-201ENST00000504195 649 ntBASIC1.89□□□□□ -2.11
CDH4P55283 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH4P55283 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH4P55283 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
CDH4P55283 AC007375.1-201ENST00000554513 578 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC090616.2-202ENST00000584248 222 ntBASIC1.89□□□□□ -2.11
CDH4P55283 MIR548AC-201ENST00000585049 88 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC025811.1-201ENST00000604312 472 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC138749.5-201ENST00000611461 208 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC012409.4-201ENST00000612923 249 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC027807.2-201ENST00000616099 408 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AC116165.2-201ENST00000616705 206 ntBASIC1.89□□□□□ -2.11
CDH4P55283 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH4P55283 AC008993.2-201ENST00000631744 806 ntBASIC1.89□□□□□ -2.11
CDH4P55283 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms