Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.01□□□□□ -1.93
NR1H2P55055 AC118273.2-201ENST00000532092 465 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 CR383656.8-201ENST00000549046 145 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 AC090115.3-201ENST00000553218 849 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 MTCO3P13-201ENST00000577757 781 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 MIR4765-201ENST00000585007 77 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.01□□□□□ -1.93
NR1H2P55055 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 AC138627.2-201ENST00000624202 601 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 AL109809.4-201ENST00000603520 2185 ntBASIC3.01□□□□□ -1.93
NR1H2P55055 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
NR1H2P55055 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3□□□□□ -1.93
NR1H2P55055 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
NR1H2P55055 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3□□□□□ -1.93
NR1H2P55055 RNU6-858P-201ENST00000362436 107 ntBASIC3□□□□□ -1.93
NR1H2P55055 Y_RNA.167-201ENST00000363735 109 ntBASIC3□□□□□ -1.93
NR1H2P55055 Y_RNA.303-201ENST00000364998 94 ntBASIC3□□□□□ -1.93
NR1H2P55055 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NR1H2P55055 SNORA48.5-201ENST00000391143 135 ntBASIC3□□□□□ -1.93
NR1H2P55055 SNORA26.7-201ENST00000391288 122 ntBASIC3□□□□□ -1.93
NR1H2P55055 RNU2-25P-201ENST00000411041 191 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3□□□□□ -1.93
NR1H2P55055 AC009161.1-201ENST00000417306 376 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3□□□□□ -1.93
NR1H2P55055 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3□□□□□ -1.93
NR1H2P55055 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC006028.1-201ENST00000438379 402 ntBASIC3□□□□□ -1.93
NR1H2P55055 RPL21P2-201ENST00000440049 481 ntBASIC3□□□□□ -1.93
NR1H2P55055 MTATP6P23-201ENST00000440153 476 ntBASIC3□□□□□ -1.93
NR1H2P55055 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
NR1H2P55055 LAMTOR5P1-201ENST00000444290 270 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC007547.1-201ENST00000462177 490 ntBASIC3□□□□□ -1.93
NR1H2P55055 RPS26P21-201ENST00000475397 348 ntBASIC3□□□□□ -1.93
NR1H2P55055 HIGD1AP13-201ENST00000509878 289 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3□□□□□ -1.93
NR1H2P55055 AC090136.1-201ENST00000520009 240 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3□□□□□ -1.93
NR1H2P55055 AC018638.8-201ENST00000588755 281 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC024153.1-201ENST00000603103 365 ntBASIC3□□□□□ -1.93
NR1H2P55055 uc_338.1-201ENST00000612113 180 ntBASIC3□□□□□ -1.93
NR1H2P55055 AC107871.2-201ENST00000612894 502 ntBASIC3□□□□□ -1.93
NR1H2P55055 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3□□□□□ -1.93
NR1H2P55055 AC103705.1-201ENST00000619013 241 ntBASIC3□□□□□ -1.93
NR1H2P55055 MIR6733-201ENST00000635723 61 ntBASIC3□□□□□ -1.93
NR1H2P55055 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3□□□□□ -1.93
NR1H2P55055 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NR1H2P55055 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.99□□□□□ -1.93
NR1H2P55055 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NR1H2P55055 RNU1-70P-201ENST00000362618 164 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 RNU6-486P-201ENST00000363116 107 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 SNORD56.5-201ENST00000364281 72 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 Y_RNA.324-201ENST00000365165 102 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 SNORA32.2-201ENST00000384049 122 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 RNY3P14-201ENST00000384309 102 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NR1H2P55055 FO393413.1-201ENST00000402892 195 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 FTH1P15-201ENST00000406984 280 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 RNU2-3P-201ENST00000410144 191 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 CYCSP33-201ENST00000414485 327 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 PGBD4P6-201ENST00000421501 610 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.99□□□□□ -1.93
NR1H2P55055 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.99□□□□□ -1.93
NR1H2P55055 FABP5P14-201ENST00000437273 393 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 RPL39P40-201ENST00000445481 146 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AL671855.1-201ENST00000446875 1203 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 snoU109.2-201ENST00000459316 135 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 MED28P2-201ENST00000475771 317 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 RNU6-1314P-201ENST00000517139 104 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AC012493.2-201ENST00000595083 291 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AC078899.3-201ENST00000599065 212 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AC008121.1-201ENST00000603244 268 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AC002044.1-201ENST00000606707 158 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AL627309.6-201ENST00000606857 840 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.99□□□□□ -1.93
NR1H2P55055 MIR8057-201ENST00000620957 69 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 MIR6852-201ENST00000621699 66 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.99□□□□□ -1.93
NR1H2P55055 AL355596.1-201ENST00000565399 3996 ntBASIC2.99□□□□□ -1.93
NR1H2P55055 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NR1H2P55055 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
NR1H2P55055 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NR1H2P55055 AC121333.1-201ENST00000567488 2709 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
NR1H2P55055 RNU6-487P-201ENST00000365430 104 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.98□□□□□ -1.93
NR1H2P55055 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.98□□□□□ -1.93
NR1H2P55055 RPLP0P7-201ENST00000416050 667 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 AC092427.1-202ENST00000430569 476 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.98□□□□□ -1.93
NR1H2P55055 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.98□□□□□ -1.93
NR1H2P55055 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.98□□□□□ -1.93
NR1H2P55055 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.98□□□□□ -1.93
NR1H2P55055 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.98□□□□□ -1.93
NR1H2P55055 MTCO2P30-201ENST00000503662 364 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 AC010486.1-201ENST00000511793 424 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 SNORA14.1-201ENST00000516113 141 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 Y_RNA.687-201ENST00000516558 91 ntBASIC2.98□□□□□ -1.93
NR1H2P55055 SNORA20.3-201ENST00000516880 132 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms