Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SNORD1A-201ENST00000364968 72 ntBASIC0.94□□□□□ -2.26
NUP98P52948 RNU6-338P-201ENST00000383888 105 ntBASIC0.94□□□□□ -2.26
NUP98P52948 MIR936-201ENST00000401264 98 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AL139397.2-201ENST00000404529 772 ntBASIC0.94□□□□□ -2.26
NUP98P52948 BTF3L4P3-201ENST00000418879 476 ntBASIC0.94□□□□□ -2.26
NUP98P52948 MTATP6P30-201ENST00000443540 664 ntBASIC0.94□□□□□ -2.26
NUP98P52948 RPL23AP35-201ENST00000451906 501 ntBASIC0.94□□□□□ -2.26
NUP98P52948 OR6C5P-201ENST00000452388 923 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.94□□□□□ -2.26
NUP98P52948 PRELID3BP1-201ENST00000457142 540 ntBASIC0.94□□□□□ -2.26
NUP98P52948 RNU7-136P-201ENST00000458819 69 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.94□□□□□ -2.26
NUP98P52948 RNU6-390P-201ENST00000516259 103 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AC087854.1-201ENST00000519706 414 ntBASIC0.94□□□□□ -2.26
NUP98P52948 SLC2A13P1-201ENST00000531560 322 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AL160236.1-201ENST00000556317 195 ntBASIC0.94□□□□□ -2.26
NUP98P52948 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.94□□□□□ -2.26
NUP98P52948 AL445264.1-201ENST00000621719 171 ntBASIC0.94□□□□□ -2.26
NUP98P52948 RNU6-898P-201ENST00000365627 104 ntBASIC0.93□□□□□ -2.26
NUP98P52948 RNU6-546P-201ENST00000383991 107 ntBASIC0.93□□□□□ -2.26
NUP98P52948 BTF3L4P2-201ENST00000392798 346 ntBASIC0.93□□□□□ -2.26
NUP98P52948 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.93□□□□□ -2.26
NUP98P52948 AC023194.1-201ENST00000493084 308 ntBASIC0.93□□□□□ -2.26
NUP98P52948 AC114801.2-201ENST00000503825 781 ntBASIC0.93□□□□□ -2.26
NUP98P52948 PTP4A1P4-201ENST00000512479 322 ntBASIC0.93□□□□□ -2.26
NUP98P52948 ACA59.2-201ENST00000517061 156 ntBASIC0.93□□□□□ -2.26
NUP98P52948 RNU6-586P-201ENST00000517265 104 ntBASIC0.93□□□□□ -2.26
NUP98P52948 MTCO3P15-201ENST00000526563 574 ntBASIC0.93□□□□□ -2.26
NUP98P52948 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.93□□□□□ -2.26
NUP98P52948 OR5B19P-201ENST00000531766 928 ntBASIC0.93□□□□□ -2.26
NUP98P52948 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.93□□□□□ -2.26
NUP98P52948 ZNF971P-201ENST00000562068 1249 ntBASIC0.93□□□□□ -2.26
NUP98P52948 LINC00557-201ENST00000563184 1279 ntBASIC0.93□□□□□ -2.26
NUP98P52948 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.93□□□□□ -2.26
NUP98P52948 RPL30P11-203ENST00000598995 310 ntBASIC0.93□□□□□ -2.26
NUP98P52948 AL355598.1-201ENST00000604169 202 ntBASIC0.93□□□□□ -2.26
NUP98P52948 AL445435.1-201ENST00000604232 665 ntBASIC0.93□□□□□ -2.26
NUP98P52948 NDUFA8P1-201ENST00000605525 367 ntBASIC0.93□□□□□ -2.26
NUP98P52948 AC010975.3-201ENST00000618727 978 ntBASIC0.93□□□□□ -2.26
NUP98P52948 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.93□□□□□ -2.26
NUP98P52948 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
NUP98P52948 RNU1-23P-201ENST00000363361 144 ntBASIC0.92□□□□□ -2.26
NUP98P52948 FTH1P15-201ENST00000406984 280 ntBASIC0.92□□□□□ -2.26
NUP98P52948 MIR1305-201ENST00000408300 86 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.92□□□□□ -2.26
NUP98P52948 AL445305.1-201ENST00000432577 575 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AL591212.2-201ENST00000433923 257 ntBASIC0.92□□□□□ -2.26
NUP98P52948 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP98P52948 AC010631.1-201ENST00000474150 156 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC112198.4-201ENST00000515450 351 ntBASIC0.92□□□□□ -2.26
NUP98P52948 RNU6-572P-201ENST00000516724 80 ntBASIC0.92□□□□□ -2.26
NUP98P52948 RNU6-1183P-201ENST00000517054 60 ntBASIC0.92□□□□□ -2.26
NUP98P52948 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.92□□□□□ -2.26
NUP98P52948 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP98P52948 AC122134.1-202ENST00000569111 1201 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP98P52948 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.92□□□□□ -2.26
NUP98P52948 AL079343.1-201ENST00000572358 1771 ntBASIC0.92□□□□□ -2.26
NUP98P52948 OR5T3-201ENST00000303059 1023 ntBASIC0.92□□□□□ -2.26
NUP98P52948 MIR424-201ENST00000362227 98 ntBASIC0.92□□□□□ -2.26
NUP98P52948 RNU6-37P-201ENST00000362692 107 ntBASIC0.92□□□□□ -2.26
NUP98P52948 Y_RNA.67-201ENST00000362870 100 ntBASIC0.92□□□□□ -2.26
NUP98P52948 RNU6-288P-201ENST00000363690 104 ntBASIC0.92□□□□□ -2.26
NUP98P52948 RNU6-11P-201ENST00000364234 107 ntBASIC0.92□□□□□ -2.26
NUP98P52948 Y_RNA.393-201ENST00000383936 102 ntBASIC0.92□□□□□ -2.26
NUP98P52948 SNORD14D-201ENST00000384390 87 ntBASIC0.92□□□□□ -2.26
NUP98P52948 MIR518D-201ENST00000385014 87 ntBASIC0.92□□□□□ -2.26
NUP98P52948 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
NUP98P52948 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
NUP98P52948 RNU6-360P-201ENST00000390944 104 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC138623.1-201ENST00000418060 216 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.92□□□□□ -2.26
NUP98P52948 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP98P52948 PTENP1-201ENST00000447117 1215 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC079776.3-201ENST00000450665 370 ntBASIC0.92□□□□□ -2.26
NUP98P52948 RPL18AP17-201ENST00000455326 198 ntBASIC0.92□□□□□ -2.26
NUP98P52948 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP98P52948 AC116655.1-201ENST00000508324 901 ntBASIC0.92□□□□□ -2.26
NUP98P52948 RNU6-143P-201ENST00000516942 93 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP98P52948 AC023632.1-201ENST00000518463 375 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC022616.8-201ENST00000533569 253 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.92□□□□□ -2.26
NUP98P52948 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP98P52948 AC136619.2-201ENST00000563361 631 ntBASIC0.92□□□□□ -2.26
NUP98P52948 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.92□□□□□ -2.26
NUP98P52948 AF038458.1-201ENST00000588406 262 ntBASIC0.92□□□□□ -2.26
NUP98P52948 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.92□□□□□ -2.26
NUP98P52948 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
NUP98P52948 SNORA40C-201ENST00000391285 128 ntBASIC0.91□□□□□ -2.26
NUP98P52948 UBE2V1P15-201ENST00000407776 448 ntBASIC0.91□□□□□ -2.26
NUP98P52948 MTND1P31-201ENST00000449206 961 ntBASIC0.91□□□□□ -2.26
NUP98P52948 AC092001.1-201ENST00000453012 261 ntBASIC0.91□□□□□ -2.26
NUP98P52948 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.91□□□□□ -2.26
NUP98P52948 BTF3P15-201ENST00000455606 336 ntBASIC0.91□□□□□ -2.26
NUP98P52948 RNU6-1132P-201ENST00000459214 107 ntBASIC0.91□□□□□ -2.26
NUP98P52948 AC139453.3-201ENST00000493276 369 ntBASIC0.91□□□□□ -2.26
NUP98P52948 TPT1P8-201ENST00000510120 555 ntBASIC0.91□□□□□ -2.26
NUP98P52948 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.91□□□□□ -2.26
NUP98P52948 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms