Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC005261.5-201ENST00000596280 355 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC002044.1-201ENST00000606707 158 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC068944.2-201ENST00000610373 403 ntBASIC2.63□□□□□ -1.99
PDX1P52945 DISC2.1-201ENST00000612827 205 ntBASIC2.63□□□□□ -1.99
PDX1P52945 MIR6817-201ENST00000615588 66 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC010378.1-201ENST00000619270 362 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AL031601.2-202ENST00000622650 282 ntBASIC2.63□□□□□ -1.99
PDX1P52945 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
PDX1P52945 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
PDX1P52945 CDC27P3-201ENST00000635418 1910 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC092593.1-201ENST00000515413 1815 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC092435.3-201ENST00000565538 3654 ntBASIC2.63□□□□□ -1.99
PDX1P52945 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PDX1P52945 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PDX1P52945 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PDX1P52945 Y_RNA.167-201ENST00000363735 109 ntBASIC2.62□□□□□ -1.99
PDX1P52945 RNA5SP68-201ENST00000363885 119 ntBASIC2.62□□□□□ -1.99
PDX1P52945 Y_RNA.248-201ENST00000364501 109 ntBASIC2.62□□□□□ -1.99
PDX1P52945 Y_RNA.399-201ENST00000383955 105 ntBASIC2.62□□□□□ -1.99
PDX1P52945 RNU6-1027P-201ENST00000383998 107 ntBASIC2.62□□□□□ -1.99
PDX1P52945 RNU6-434P-201ENST00000384376 107 ntBASIC2.62□□□□□ -1.99
PDX1P52945 RNA5SP219-201ENST00000390940 113 ntBASIC2.62□□□□□ -1.99
PDX1P52945 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.62□□□□□ -1.99
PDX1P52945 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.62□□□□□ -1.99
PDX1P52945 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.62□□□□□ -1.99
PDX1P52945 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.62□□□□□ -1.99
PDX1P52945 FGF7P6-202ENST00000451282 293 ntBASIC2.62□□□□□ -1.99
PDX1P52945 RNU7-167P-201ENST00000459160 62 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
PDX1P52945 RPL21P99-201ENST00000480369 423 ntBASIC2.62□□□□□ -1.99
PDX1P52945 HMGB1P30-201ENST00000492455 606 ntBASIC2.62□□□□□ -1.99
PDX1P52945 TBCAP3-201ENST00000512475 312 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AC074344.1-201ENST00000512823 224 ntBASIC2.62□□□□□ -1.99
PDX1P52945 LRRC34P2-201ENST00000514850 553 ntBASIC2.62□□□□□ -1.99
PDX1P52945 SNORD60.2-201ENST00000516883 86 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.62□□□□□ -1.99
PDX1P52945 CENPUP1-201ENST00000526649 1202 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.62□□□□□ -1.99
PDX1P52945 OR11H5P-201ENST00000554039 926 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AL121821.2-201ENST00000556081 394 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.62□□□□□ -1.99
PDX1P52945 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.62□□□□□ -1.99
PDX1P52945 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.62□□□□□ -1.99
PDX1P52945 VN1R80P-201ENST00000597126 338 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.62□□□□□ -1.99
PDX1P52945 AP000907.4-201ENST00000604143 237 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AC123912.5-201ENST00000605470 343 ntBASIC2.62□□□□□ -1.99
PDX1P52945 AC104458.1-201ENST00000608243 463 ntBASIC2.62□□□□□ -1.99
PDX1P52945 U6.42-201ENST00000618440 107 ntBASIC2.62□□□□□ -1.99
PDX1P52945 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.62□□□□□ -1.99
PDX1P52945 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.62□□□□□ -1.99
PDX1P52945 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PDX1P52945 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.62□□□□□ -1.99
PDX1P52945 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDX1P52945 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PDX1P52945 AC008669.1-201ENST00000565823 2178 ntBASIC2.61□□□□□ -1.99
PDX1P52945 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.61□□□□□ -1.99
PDX1P52945 RNU6-266P-201ENST00000364225 107 ntBASIC2.61□□□□□ -1.99
PDX1P52945 MIR887-201ENST00000401258 79 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AL590004.2-201ENST00000404787 371 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.61□□□□□ -1.99
PDX1P52945 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.61□□□□□ -1.99
PDX1P52945 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.61□□□□□ -1.99
PDX1P52945 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.61□□□□□ -1.99
PDX1P52945 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.61□□□□□ -1.99
PDX1P52945 AL513043.1-201ENST00000439124 535 ntBASIC2.61□□□□□ -1.99
PDX1P52945 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.61□□□□□ -1.99
PDX1P52945 NFU1P2-201ENST00000448700 469 ntBASIC2.61□□□□□ -1.99
PDX1P52945 BTF3P15-201ENST00000455606 336 ntBASIC2.61□□□□□ -1.99
PDX1P52945 RPS29P12-201ENST00000460178 152 ntBASIC2.61□□□□□ -1.99
PDX1P52945 HMGN2P26-201ENST00000463169 339 ntBASIC2.61□□□□□ -1.99
PDX1P52945 RPS26P21-201ENST00000475397 348 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC090525.1-201ENST00000479116 478 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC026801.1-201ENST00000497178 464 ntBASIC2.61□□□□□ -1.99
PDX1P52945 MTCYBP18-201ENST00000501056 747 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.61□□□□□ -1.99
PDX1P52945 MRPS36P2-201ENST00000512569 299 ntBASIC2.61□□□□□ -1.99
PDX1P52945 Y_RNA.665-201ENST00000516177 98 ntBASIC2.61□□□□□ -1.99
PDX1P52945 Y_RNA.687-201ENST00000516558 91 ntBASIC2.61□□□□□ -1.99
PDX1P52945 SNORA25.17-201ENST00000517184 124 ntBASIC2.61□□□□□ -1.99
PDX1P52945 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.61□□□□□ -1.99
PDX1P52945 HPRT1P3-201ENST00000539521 576 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.61□□□□□ -1.99
PDX1P52945 NACAP3-201ENST00000552100 481 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC078814.3-201ENST00000553036 491 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC025281.1-201ENST00000567026 265 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.61□□□□□ -1.99
PDX1P52945 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.61□□□□□ -1.99
PDX1P52945 AC104984.5-201ENST00000586878 94 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC092747.3-201ENST00000603769 301 ntBASIC2.61□□□□□ -1.99
PDX1P52945 RNU6-89P-201ENST00000606519 100 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC092807.2-201ENST00000609367 243 ntBASIC2.61□□□□□ -1.99
PDX1P52945 AC011890.2-201ENST00000613393 294 ntBASIC2.61□□□□□ -1.99
PDX1P52945 MIR3662-201ENST00000637030 95 ntBASIC2.61□□□□□ -1.99
PDX1P52945 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.61□□□□□ -1.99
PDX1P52945 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PDX1P52945 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PDX1P52945 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PDX1P52945 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
PDX1P52945 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms