Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU4-1-201ENST00000363925 141 ntBASIC2.31□□□□□ -2.04
GPC3P51654 SNORA20.2-201ENST00000383922 131 ntBASIC2.31□□□□□ -2.04
GPC3P51654 RNU6-166P-201ENST00000384371 107 ntBASIC2.31□□□□□ -2.04
GPC3P51654 MIR518D-201ENST00000385014 87 ntBASIC2.31□□□□□ -2.04
GPC3P51654 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
GPC3P51654 AL133475.1-201ENST00000404414 305 ntBASIC2.31□□□□□ -2.04
GPC3P51654 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.31□□□□□ -2.04
GPC3P51654 RNU2-2P-201ENST00000410396 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AC127391.1-201ENST00000411737 98 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.31□□□□□ -2.04
GPC3P51654 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.31□□□□□ -2.04
GPC3P51654 AL445646.1-201ENST00000431784 216 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.31□□□□□ -2.04
GPC3P51654 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.31□□□□□ -2.04
GPC3P51654 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.31□□□□□ -2.04
GPC3P51654 AC007182.2-201ENST00000489251 402 ntBASIC2.31□□□□□ -2.04
GPC3P51654 FAM92A1P2-202ENST00000504766 877 ntBASIC2.31□□□□□ -2.04
GPC3P51654 MTND4P2-201ENST00000507767 1203 ntBASIC2.31□□□□□ -2.04
GPC3P51654 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.31□□□□□ -2.04
GPC3P51654 OR5AQ1P-201ENST00000527596 927 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AC137800.2-201ENST00000574375 120 ntBASIC2.31□□□□□ -2.04
GPC3P51654 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
GPC3P51654 MIR15A-201ENST00000607334 83 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AC109347.2-201ENST00000610220 349 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.15-201ENST00000611544 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AC073114.1-201ENST00000612027 490 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.16-201ENST00000613119 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.12-201ENST00000613778 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.20-201ENST00000613956 192 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AL133173.2-201ENST00000614270 90 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.9-201ENST00000615427 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 AL359547.2-201ENST00000615810 418 ntBASIC2.31□□□□□ -2.04
GPC3P51654 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.11-201ENST00000616345 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.2-201ENST00000616535 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.3-201ENST00000617785 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.19-201ENST00000618602 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 RNU2-1-201ENST00000618664 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.6-201ENST00000619225 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.5-201ENST00000619465 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 U2.10-201ENST00000620268 191 ntBASIC2.31□□□□□ -2.04
GPC3P51654 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
GPC3P51654 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
GPC3P51654 ELL2P3-201ENST00000457883 1602 ntBASIC2.31□□□□□ -2.04
GPC3P51654 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC3P51654 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC3P51654 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
GPC3P51654 RNU5E-1-201ENST00000362477 120 ntBASIC2.3□□□□□ -2.04
GPC3P51654 SNORD114-19-201ENST00000363072 75 ntBASIC2.3□□□□□ -2.04
GPC3P51654 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC3P51654 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC3P51654 MIR561-201ENST00000385216 97 ntBASIC2.3□□□□□ -2.04
GPC3P51654 AC138623.1-201ENST00000418060 216 ntBASIC2.3□□□□□ -2.04
GPC3P51654 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.3□□□□□ -2.04
GPC3P51654 RPL23AP30-201ENST00000432419 501 ntBASIC2.3□□□□□ -2.04
GPC3P51654 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.3□□□□□ -2.04
GPC3P51654 AC073614.1-201ENST00000438690 650 ntBASIC2.3□□□□□ -2.04
GPC3P51654 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.3□□□□□ -2.04
GPC3P51654 MTND1P27-201ENST00000451117 902 ntBASIC2.3□□□□□ -2.04
GPC3P51654 RPS27AP8-201ENST00000452665 445 ntBASIC2.3□□□□□ -2.04
GPC3P51654 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.3□□□□□ -2.04
GPC3P51654 AC117522.1-201ENST00000509821 380 ntBASIC2.3□□□□□ -2.04
GPC3P51654 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.3□□□□□ -2.04
GPC3P51654 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.3□□□□□ -2.04
GPC3P51654 Y_RNA.689-201ENST00000516589 107 ntBASIC2.3□□□□□ -2.04
GPC3P51654 RNU2-46P-201ENST00000517038 113 ntBASIC2.3□□□□□ -2.04
GPC3P51654 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.3□□□□□ -2.04
GPC3P51654 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.3□□□□□ -2.04
GPC3P51654 AC087883.1-201ENST00000551882 391 ntBASIC2.3□□□□□ -2.04
GPC3P51654 AL158063.1-201ENST00000615349 536 ntBASIC2.3□□□□□ -2.04
GPC3P51654 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.3□□□□□ -2.04
GPC3P51654 MIR3529-201ENST00000637713 78 ntBASIC2.3□□□□□ -2.04
GPC3P51654 AC241585.2-209ENST00000638217 143 ntBASIC2.3□□□□□ -2.04
GPC3P51654 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC3P51654 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC3P51654 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
GPC3P51654 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
GPC3P51654 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
GPC3P51654 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
GPC3P51654 Y_RNA.77-201ENST00000362962 107 ntBASIC2.29□□□□□ -2.04
GPC3P51654 U8.3-201ENST00000363321 132 ntBASIC2.29□□□□□ -2.04
GPC3P51654 MIR558-201ENST00000384920 94 ntBASIC2.29□□□□□ -2.04
GPC3P51654 RNU2-39P-201ENST00000410604 198 ntBASIC2.29□□□□□ -2.04
GPC3P51654 RNU6-387P-201ENST00000411331 105 ntBASIC2.29□□□□□ -2.04
GPC3P51654 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.29□□□□□ -2.04
GPC3P51654 HMGB3P2-201ENST00000411913 584 ntBASIC2.29□□□□□ -2.04
GPC3P51654 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.29□□□□□ -2.04
GPC3P51654 AC092809.3-201ENST00000415453 231 ntBASIC2.29□□□□□ -2.04
GPC3P51654 EDDM3CP-201ENST00000415977 425 ntBASIC2.29□□□□□ -2.04
GPC3P51654 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.29□□□□□ -2.04
GPC3P51654 AC079781.2-201ENST00000446424 169 ntBASIC2.29□□□□□ -2.04
GPC3P51654 RPL31P3-201ENST00000458430 332 ntBASIC2.29□□□□□ -2.04
GPC3P51654 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.29□□□□□ -2.04
GPC3P51654 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.29□□□□□ -2.04
GPC3P51654 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.29□□□□□ -2.04
GPC3P51654 CLIC4P2-201ENST00000601934 717 ntBASIC2.29□□□□□ -2.04
GPC3P51654 AC245014.2-201ENST00000603689 287 ntBASIC2.29□□□□□ -2.04
GPC3P51654 AC246785.4-201ENST00000605374 287 ntBASIC2.29□□□□□ -2.04
GPC3P51654 Z69908.1-201ENST00000622603 247 ntBASIC2.29□□□□□ -2.04
GPC3P51654 AL031601.2-202ENST00000622650 282 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms