Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL359854.1-201ENST00000614203 1594 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK1P49759 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLK1P49759 Y_RNA.11-201ENST00000362375 109 ntBASIC2.74□□□□□ -1.97
CLK1P49759 RNU6-179P-201ENST00000363350 107 ntBASIC2.74□□□□□ -1.97
CLK1P49759 Y_RNA.142-201ENST00000363491 102 ntBASIC2.74□□□□□ -1.97
CLK1P49759 RNU6-522P-201ENST00000364497 107 ntBASIC2.74□□□□□ -1.97
CLK1P49759 SNORA71.1-201ENST00000364523 117 ntBASIC2.74□□□□□ -1.97
CLK1P49759 SNORA6-201ENST00000384033 151 ntBASIC2.74□□□□□ -1.97
CLK1P49759 Y_RNA.529-201ENST00000384586 119 ntBASIC2.74□□□□□ -1.97
CLK1P49759 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CLK1P49759 AL356432.1-201ENST00000405809 419 ntBASIC2.74□□□□□ -1.97
CLK1P49759 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.74□□□□□ -1.97
CLK1P49759 U6atac.2-201ENST00000408644 118 ntBASIC2.74□□□□□ -1.97
CLK1P49759 Y_RNA.615-201ENST00000410769 117 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.74□□□□□ -1.97
CLK1P49759 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK1P49759 MTCO3P46-201ENST00000425787 232 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AL161651.1-201ENST00000440882 223 ntBASIC2.74□□□□□ -1.97
CLK1P49759 HMGN2P10-201ENST00000448085 265 ntBASIC2.74□□□□□ -1.97
CLK1P49759 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLK1P49759 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.74□□□□□ -1.97
CLK1P49759 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.74□□□□□ -1.97
CLK1P49759 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.74□□□□□ -1.97
CLK1P49759 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.74□□□□□ -1.97
CLK1P49759 RNU4-29P-201ENST00000515943 174 ntBASIC2.74□□□□□ -1.97
CLK1P49759 SNORA31.6-201ENST00000516241 130 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AC107953.1-201ENST00000522216 297 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK1P49759 ELOCP31-201ENST00000540463 467 ntBASIC2.74□□□□□ -1.97
CLK1P49759 RPS3AP23-202ENST00000574601 686 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AC105245.1-201ENST00000581934 244 ntBASIC2.74□□□□□ -1.97
CLK1P49759 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK1P49759 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK1P49759 AC008121.1-201ENST00000603244 268 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AC098826.3-201ENST00000603823 466 ntBASIC2.74□□□□□ -1.97
CLK1P49759 AL161798.1-201ENST00000604630 131 ntBASIC2.74□□□□□ -1.97
CLK1P49759 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLK1P49759 AC005858.4-201ENST00000623191 700 ntBASIC2.74□□□□□ -1.97
CLK1P49759 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLK1P49759 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK1P49759 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.74□□□□□ -1.97
CLK1P49759 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
CLK1P49759 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLK1P49759 Y_RNA.167-201ENST00000363735 109 ntBASIC2.73□□□□□ -1.97
CLK1P49759 U3.12-201ENST00000364498 214 ntBASIC2.73□□□□□ -1.97
CLK1P49759 RNU6-851P-201ENST00000384565 107 ntBASIC2.73□□□□□ -1.97
CLK1P49759 RNU6-19P-201ENST00000384718 107 ntBASIC2.73□□□□□ -1.97
CLK1P49759 Y_RNA.576-201ENST00000384781 102 ntBASIC2.73□□□□□ -1.97
CLK1P49759 MT-TD-201ENST00000387419 68 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
CLK1P49759 RNU2-29P-201ENST00000410423 189 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
CLK1P49759 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.73□□□□□ -1.97
CLK1P49759 ERLEC1P1-201ENST00000433806 578 ntBASIC2.73□□□□□ -1.97
CLK1P49759 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.73□□□□□ -1.97
CLK1P49759 NIPA2P5-201ENST00000452282 464 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AP000705.1-201ENST00000454567 350 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.73□□□□□ -1.97
CLK1P49759 BX510359.1-201ENST00000456973 237 ntBASIC2.73□□□□□ -1.97
CLK1P49759 CCDC34P1-201ENST00000507441 517 ntBASIC2.73□□□□□ -1.97
CLK1P49759 FGF7P4-201ENST00000509595 295 ntBASIC2.73□□□□□ -1.97
CLK1P49759 Y_RNA.665-201ENST00000516177 98 ntBASIC2.73□□□□□ -1.97
CLK1P49759 RNA5SP503-201ENST00000517047 117 ntBASIC2.73□□□□□ -1.97
CLK1P49759 RNU6-1314P-201ENST00000517139 104 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.73□□□□□ -1.97
CLK1P49759 AL118558.2-201ENST00000556294 238 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.73□□□□□ -1.97
CLK1P49759 MIR5583-1-201ENST00000580941 59 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AL353621.2-201ENST00000605340 133 ntBASIC2.73□□□□□ -1.97
CLK1P49759 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AL121757.2-201ENST00000611223 313 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AL162274.2-201ENST00000614406 332 ntBASIC2.73□□□□□ -1.97
CLK1P49759 AC009248.2-201ENST00000619826 254 ntBASIC2.73□□□□□ -1.97
CLK1P49759 MIR8057-201ENST00000620957 69 ntBASIC2.73□□□□□ -1.97
CLK1P49759 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.73□□□□□ -1.97
CLK1P49759 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLK1P49759 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CLK1P49759 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLK1P49759 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CLK1P49759 RNU4-73P-201ENST00000363164 141 ntBASIC2.72□□□□□ -1.97
CLK1P49759 RNU6-946P-201ENST00000383878 107 ntBASIC2.72□□□□□ -1.97
CLK1P49759 Y_RNA.535-201ENST00000384612 99 ntBASIC2.72□□□□□ -1.97
CLK1P49759 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CLK1P49759 SNORD67-201ENST00000390833 111 ntBASIC2.72□□□□□ -1.97
CLK1P49759 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.72□□□□□ -1.97
CLK1P49759 RAC1P6-201ENST00000423911 575 ntBASIC2.72□□□□□ -1.97
CLK1P49759 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.72□□□□□ -1.97
CLK1P49759 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.72□□□□□ -1.97
CLK1P49759 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.72□□□□□ -1.97
CLK1P49759 IFNA11P-201ENST00000446352 526 ntBASIC2.72□□□□□ -1.97
CLK1P49759 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.72□□□□□ -1.97
CLK1P49759 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.72□□□□□ -1.97
CLK1P49759 RN7SL432P-201ENST00000484057 298 ntBASIC2.72□□□□□ -1.97
CLK1P49759 AC006445.1-201ENST00000491925 405 ntBASIC2.72□□□□□ -1.97
CLK1P49759 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLK1P49759 MTCO3P9-201ENST00000506989 781 ntBASIC2.72□□□□□ -1.97
CLK1P49759 AC117522.3-201ENST00000507974 584 ntBASIC2.72□□□□□ -1.97
CLK1P49759 AC108078.2-201ENST00000510750 236 ntBASIC2.72□□□□□ -1.97
CLK1P49759 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms