Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC087588.1-201ENST00000462203 316 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 AF186996.7-201ENST00000492781 209 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 BTF3L4P4-201ENST00000506381 449 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 RNU6-772P-201ENST00000516042 105 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 RNA5SP471-201ENST00000516971 106 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 RNU6-537P-201ENST00000517277 103 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 NACAP3-201ENST00000552100 481 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA4P43681 AC108081.1-201ENST00000604358 221 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 LINC00901.1-201ENST00000617252 152 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 AC092628.2-201ENST00000622492 339 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CHRNA4P43681 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 SRP72P2-201ENST00000344851 1979 ntBASIC4.4□□□□□ -1.71
CHRNA4P43681 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA4P43681 AC139713.2-214ENST00000642059 1811 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 MAPK10-349ENST00000641767 3661 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CHRNA4P43681 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CHRNA4P43681 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA4P43681 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 AC008555.8-201ENST00000623602 2168 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA4P43681 RNA5SP447-201ENST00000363749 119 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 snoU2_19.4-201ENST00000364329 80 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 RNU6-1180P-201ENST00000364935 107 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
CHRNA4P43681 RNU6-541P-201ENST00000384709 110 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 AC006461.1-201ENST00000412637 326 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 RAB9AP3-201ENST00000412737 573 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 AL732292.1-201ENST00000426692 226 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.39□□□□□ -1.71
CHRNA4P43681 AL627311.1-201ENST00000431514 115 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 RPL23AP52-201ENST00000439311 478 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 RAB9AP1-201ENST00000449393 573 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA4P43681 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA4P43681 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 SNORA31.22-201ENST00000517204 135 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 AC021269.2-201ENST00000532318 330 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 AC002545.1-201ENST00000592511 181 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 AC009541.1-201ENST00000438279 2662 ntBASIC4.39□□□□□ -1.71
CHRNA4P43681 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA4P43681 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CHRNA4P43681 AL353743.1-202ENST00000431724 1695 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA4P43681 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA4P43681 MTND5P35-201ENST00000557537 1720 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.38□□□□□ -1.71
CHRNA4P43681 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA4P43681 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA4P43681 RNU6-137P-201ENST00000363680 108 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 U8.6-201ENST00000364939 135 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 MIR10A-201ENST00000385043 110 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 SNORD66.1-201ENST00000391230 76 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 CYCSP32-201ENST00000440548 321 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA4P43681 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA4P43681 snoU13.1-201ENST00000459157 104 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 PPIAP21-201ENST00000464473 501 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA4P43681 RNU6-1095P-201ENST00000516148 108 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 SNORD33.1-201ENST00000516213 88 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.38□□□□□ -1.71
CHRNA4P43681 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.38□□□□□ -1.71
CHRNA4P43681 AL670379.3-201ENST00000605040 251 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 AL034408.1-202ENST00000636088 415 ntBASIC4.38□□□□□ -1.71
CHRNA4P43681 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA4P43681 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA4P43681 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA4P43681 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA4P43681 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.38□□□□□ -1.71
CHRNA4P43681 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CHRNA4P43681 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHRNA4P43681 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHRNA4P43681 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.37□□□□□ -1.71
CHRNA4P43681 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CHRNA4P43681 RNU1-32P-201ENST00000363937 159 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 Y_RNA.251-201ENST00000364551 99 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 RNU6-915P-201ENST00000364943 103 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 Y_RNA.319-201ENST00000365138 92 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 MT-TC-201ENST00000387405 66 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 RNU6-159P-201ENST00000391080 106 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 HLFP1-201ENST00000402375 499 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 Y_RNA.595-201ENST00000410403 105 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.37□□□□□ -1.71
CHRNA4P43681 PHBP16-201ENST00000446318 950 ntBASIC4.37□□□□□ -1.71
CHRNA4P43681 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms