Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC006366.1-201ENST00000422002 759 ntBASIC1.94□□□□□ -2.1
SSR1P43307 AC000111.3-201ENST00000433478 193 ntBASIC1.94□□□□□ -2.1
SSR1P43307 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
SSR1P43307 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.94□□□□□ -2.1
SSR1P43307 SNORA59A-201ENST00000459326 152 ntBASIC1.94□□□□□ -2.1
SSR1P43307 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.94□□□□□ -2.1
SSR1P43307 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.94□□□□□ -2.1
SSR1P43307 AC136619.2-201ENST00000563361 631 ntBASIC1.94□□□□□ -2.1
SSR1P43307 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.94□□□□□ -2.1
SSR1P43307 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.94□□□□□ -2.1
SSR1P43307 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.94□□□□□ -2.1
SSR1P43307 AC012409.4-201ENST00000612923 249 ntBASIC1.94□□□□□ -2.1
SSR1P43307 AC092140.2-201ENST00000618027 521 ntBASIC1.94□□□□□ -2.1
SSR1P43307 AC092656.1-203ENST00000624134 423 ntBASIC1.94□□□□□ -2.1
SSR1P43307 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSR1P43307 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.94□□□□□ -2.1
SSR1P43307 RNU6-500P-201ENST00000362349 107 ntBASIC1.93□□□□□ -2.1
SSR1P43307 SNORD14B-201ENST00000364533 90 ntBASIC1.93□□□□□ -2.1
SSR1P43307 RNU6-384P-201ENST00000364900 104 ntBASIC1.93□□□□□ -2.1
SSR1P43307 RNU6-1179P-201ENST00000384667 107 ntBASIC1.93□□□□□ -2.1
SSR1P43307 AL079342.1-201ENST00000401460 267 ntBASIC1.93□□□□□ -2.1
SSR1P43307 ELOCP4-201ENST00000420090 333 ntBASIC1.93□□□□□ -2.1
SSR1P43307 RPL7P34-201ENST00000433316 712 ntBASIC1.93□□□□□ -2.1
SSR1P43307 MTCYBP39-201ENST00000437562 491 ntBASIC1.93□□□□□ -2.1
SSR1P43307 MTND5P2-201ENST00000442927 1142 ntBASIC1.93□□□□□ -2.1
SSR1P43307 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.93□□□□□ -2.1
SSR1P43307 HMGB1P35-201ENST00000503360 598 ntBASIC1.93□□□□□ -2.1
SSR1P43307 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.93□□□□□ -2.1
SSR1P43307 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.93□□□□□ -2.1
SSR1P43307 RNU2-53P-201ENST00000516257 147 ntBASIC1.93□□□□□ -2.1
SSR1P43307 Y_RNA.687-201ENST00000516558 91 ntBASIC1.93□□□□□ -2.1
SSR1P43307 HSPE1P18-201ENST00000517602 280 ntBASIC1.93□□□□□ -2.1
SSR1P43307 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.93□□□□□ -2.1
SSR1P43307 AP001372.4-201ENST00000524889 472 ntBASIC1.93□□□□□ -2.1
SSR1P43307 AC011979.2-201ENST00000527568 352 ntBASIC1.93□□□□□ -2.1
SSR1P43307 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.93□□□□□ -2.1
SSR1P43307 MIR4419B-201ENST00000577260 68 ntBASIC1.93□□□□□ -2.1
SSR1P43307 BNIP3P25-201ENST00000596023 559 ntBASIC1.93□□□□□ -2.1
SSR1P43307 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.93□□□□□ -2.1
SSR1P43307 Z82243.1-201ENST00000609432 473 ntBASIC1.93□□□□□ -2.1
SSR1P43307 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.93□□□□□ -2.1
SSR1P43307 AC004908.3-201ENST00000610248 625 ntBASIC1.93□□□□□ -2.1
SSR1P43307 AC099654.13-201ENST00000639774 207 ntBASIC1.93□□□□□ -2.1
SSR1P43307 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SSR1P43307 AC138393.1-203ENST00000327086 343 ntBASIC1.92□□□□□ -2.1
SSR1P43307 RNU4-28P-201ENST00000364739 141 ntBASIC1.92□□□□□ -2.1
SSR1P43307 RNU6-641P-201ENST00000384006 107 ntBASIC1.92□□□□□ -2.1
SSR1P43307 RNU6-72P-201ENST00000384285 79 ntBASIC1.92□□□□□ -2.1
SSR1P43307 SNORD116-20-201ENST00000384529 92 ntBASIC1.92□□□□□ -2.1
SSR1P43307 MIR186-201ENST00000384988 86 ntBASIC1.92□□□□□ -2.1
SSR1P43307 SNORD115.1-201ENST00000391109 76 ntBASIC1.92□□□□□ -2.1
SSR1P43307 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.92□□□□□ -2.1
SSR1P43307 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.92□□□□□ -2.1
SSR1P43307 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.92□□□□□ -2.1
SSR1P43307 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.92□□□□□ -2.1
SSR1P43307 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.92□□□□□ -2.1
SSR1P43307 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.92□□□□□ -2.1
SSR1P43307 PSMA3P-201ENST00000555485 635 ntBASIC1.92□□□□□ -2.1
SSR1P43307 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.92□□□□□ -2.1
SSR1P43307 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
SSR1P43307 AC073410.2-201ENST00000603240 332 ntBASIC1.92□□□□□ -2.1
SSR1P43307 AL022154.1-201ENST00000604698 785 ntBASIC1.92□□□□□ -2.1
SSR1P43307 ELOCP5-201ENST00000604924 333 ntBASIC1.92□□□□□ -2.1
SSR1P43307 AC021646.1-201ENST00000605469 484 ntBASIC1.92□□□□□ -2.1
SSR1P43307 AC087045.1-201ENST00000605856 382 ntBASIC1.92□□□□□ -2.1
SSR1P43307 AL121992.2-201ENST00000606262 256 ntBASIC1.92□□□□□ -2.1
SSR1P43307 AL157786.1-207ENST00000627771 695 ntBASIC1.92□□□□□ -2.1
SSR1P43307 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SSR1P43307 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.91□□□□□ -2.1
SSR1P43307 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SSR1P43307 Y_RNA.22-201ENST00000362492 102 ntBASIC1.91□□□□□ -2.1
SSR1P43307 SNORD114-19-201ENST00000363072 75 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RNU1-57P-201ENST00000384491 166 ntBASIC1.91□□□□□ -2.1
SSR1P43307 MIR95-201ENST00000385072 81 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RNA5SP111-201ENST00000411386 101 ntBASIC1.91□□□□□ -2.1
SSR1P43307 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.91□□□□□ -2.1
SSR1P43307 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.91□□□□□ -2.1
SSR1P43307 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.91□□□□□ -2.1
SSR1P43307 USP9YP15-201ENST00000442391 422 ntBASIC1.91□□□□□ -2.1
SSR1P43307 AL360271.2-201ENST00000447710 161 ntBASIC1.91□□□□□ -2.1
SSR1P43307 PPP1R2P5-201ENST00000457256 603 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RAP1BP2-201ENST00000478270 544 ntBASIC1.91□□□□□ -2.1
SSR1P43307 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RPS29P21-201ENST00000496272 170 ntBASIC1.91□□□□□ -2.1
SSR1P43307 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.91□□□□□ -2.1
SSR1P43307 RNU1-86P-201ENST00000516108 154 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RNU1-107P-201ENST00000516617 154 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RNU6-667P-201ENST00000517186 102 ntBASIC1.91□□□□□ -2.1
SSR1P43307 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
SSR1P43307 CYCSP27-201ENST00000527643 293 ntBASIC1.91□□□□□ -2.1
SSR1P43307 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.91□□□□□ -2.1
SSR1P43307 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.91□□□□□ -2.1
SSR1P43307 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.91□□□□□ -2.1
SSR1P43307 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.91□□□□□ -2.1
SSR1P43307 AC234772.3-201ENST00000602277 528 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RNU6-87P-201ENST00000607561 108 ntBASIC1.91□□□□□ -2.1
SSR1P43307 AL359740.1-201ENST00000624340 592 ntBASIC1.91□□□□□ -2.1
SSR1P43307 AC006927.3-201ENST00000638789 384 ntBASIC1.91□□□□□ -2.1
SSR1P43307 RNU5E-5P-201ENST00000365379 116 ntBASIC1.9□□□□□ -2.11
SSR1P43307 RNU6-1274P-201ENST00000384557 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms