Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC068587.5-201ENST00000528506 175 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN4P29074 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN4P29074 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN4P29074 AL391840.1-201ENST00000571144 367 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN4P29074 AC068790.2-201ENST00000602601 557 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AL138889.2-201ENST00000603883 242 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN4P29074 AC096772.1-201ENST00000609146 564 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPN4P29074 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC093648.1-201ENST00000623546 606 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC092656.1-203ENST00000624134 423 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN4P29074 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN4P29074 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN4P29074 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTPN4P29074 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 SNORA51.11-201ENST00000384442 131 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN4P29074 AC003685.2-201ENST00000422795 395 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AL160275.3-201ENST00000423876 471 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.3□□□□□ -2.04
PTPN4P29074 RPS15AP9-201ENST00000439856 381 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC012308.1-201ENST00000451232 178 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN4P29074 HMGB1P30-201ENST00000492455 606 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 CKS1BP2-201ENST00000497342 240 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN4P29074 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN4P29074 SNORD27.1-201ENST00000516319 72 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 RNU5B-3P-201ENST00000516601 115 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.3□□□□□ -2.04
PTPN4P29074 AC024909.2-201ENST00000553035 286 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN4P29074 MIR5692A1-201ENST00000580523 69 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN4P29074 AC025165.5-201ENST00000602802 578 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 SNORD14A-201ENST00000606526 91 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.3□□□□□ -2.04
PTPN4P29074 U4atac.1-201ENST00000618345 95 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 uc_338.11-201ENST00000619132 160 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AC138627.2-201ENST00000624202 601 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 AL359757.2-201ENST00000624309 274 ntBASIC2.3□□□□□ -2.04
PTPN4P29074 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.3□□□□□ -2.04
PTPN4P29074 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTPN4P29074 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN4P29074 HAUS6P2-201ENST00000433254 2404 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
PTPN4P29074 RNA5SP125-201ENST00000364843 120 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 Z98749.2-208ENST00000381646 500 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 MIR1-2-201ENST00000384961 85 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN4P29074 Y_RNA.623-201ENST00000411128 95 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 HMGB3P2-201ENST00000411913 584 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN4P29074 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN4P29074 TOMM20P4-201ENST00000427861 435 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 MTCO2P11-201ENST00000431069 680 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN4P29074 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN4P29074 IFNA11P-201ENST00000446352 526 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC132479.1-201ENST00000449160 144 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN4P29074 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN4P29074 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.29□□□□□ -2.04
PTPN4P29074 AC079804.2-201ENST00000490376 200 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 RBBP4P6-201ENST00000508098 202 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 RNU6-581P-201ENST00000516214 105 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC021269.2-201ENST00000532318 330 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN4P29074 AL138976.2-201ENST00000563989 694 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 RPS3AP23-202ENST00000574601 686 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC008521.1-201ENST00000587471 187 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC087683.1-201ENST00000591187 441 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC073648.5-201ENST00000603502 305 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AL670379.10-201ENST00000604330 253 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AL670379.9-201ENST00000605428 253 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AC136475.10-201ENST00000620253 385 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 SCARNA4-202ENST00000625402 129 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AL157786.1-207ENST00000627771 695 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 U6.114-201ENST00000636407 96 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 MIR3529-201ENST00000637713 78 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
PTPN4P29074 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPN4P29074 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTPN4P29074 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PTPN4P29074 RNU4-24P-201ENST00000364565 139 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 RNA5SP240-201ENST00000365355 128 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 RNU6-898P-201ENST00000365627 104 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 OR5H15-201ENST00000383696 930 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms