Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 FCF1P10-201ENST00000407590 479 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.38□□□□□ -2.19
COL5A3P25940 AL356583.2-201ENST00000426536 280 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.38□□□□□ -2.19
COL5A3P25940 MTND1P30-201ENST00000441241 901 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AC009296.1-201ENST00000443146 155 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.38□□□□□ -2.19
COL5A3P25940 ELOCP30-201ENST00000447108 299 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.38□□□□□ -2.19
COL5A3P25940 AL139824.2-201ENST00000458731 1095 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 MTCO2P6-201ENST00000463134 685 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 MTND4LP3-201ENST00000468320 276 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 RPS27P26-201ENST00000494583 239 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.38□□□□□ -2.19
COL5A3P25940 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A3P25940 AC093809.1-201ENST00000509155 340 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 RNU6-1256P-201ENST00000516539 103 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 RNU6-678P-201ENST00000516832 109 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 RNU6-1003P-201ENST00000517099 105 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.38□□□□□ -2.19
COL5A3P25940 AC068587.4-201ENST00000533893 186 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.38□□□□□ -2.19
COL5A3P25940 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.38□□□□□ -2.19
COL5A3P25940 HMGB1P14-201ENST00000557424 591 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.38□□□□□ -2.19
COL5A3P25940 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A3P25940 AC005498.1-201ENST00000592125 465 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 MTCYBP22-201ENST00000603788 447 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AP000811.1-201ENST00000603803 651 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AL161729.4-201ENST00000604650 476 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 FTX_3.1-201ENST00000610451 147 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AC108706.1-201ENST00000611053 297 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A3P25940 AC079416.3-201ENST00000624479 549 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
COL5A3P25940 MTND4P4-201ENST00000439033 1366 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 MTND4P16-201ENST00000466108 1367 ntBASIC1.38□□□□□ -2.19
COL5A3P25940 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL5A3P25940 RNU6-500P-201ENST00000362349 107 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 RNU6-637P-201ENST00000384050 107 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 RNU6-1035P-201ENST00000384477 107 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 RPS20P2-201ENST00000402520 389 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 CCNG1P1-201ENST00000406783 885 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.37□□□□□ -2.19
COL5A3P25940 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 AL365184.2-201ENST00000431139 435 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 TIMM9P1-201ENST00000436122 256 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.37□□□□□ -2.19
COL5A3P25940 OSTCP8-201ENST00000445117 448 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 ART2BP-201ENST00000453501 499 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL5A3P25940 MRPS33P3-201ENST00000513456 322 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 RNA5SP395-201ENST00000516567 118 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 MTATP6P15-201ENST00000527233 835 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC022878.1-201ENST00000530684 149 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC013828.2-201ENST00000532487 235 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL5A3P25940 AC023824.2-201ENST00000566185 400 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC112187.2-201ENST00000604345 283 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AL360219.1-201ENST00000610230 366 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.37□□□□□ -2.19
COL5A3P25940 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 MIR7844-201ENST00000616161 122 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 UCA1.1-201ENST00000620952 75 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AP002791.1-201ENST00000623291 381 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC092192.1-201ENST00000633154 1018 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC097655.1-201ENST00000635075 318 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC009902.3-201ENST00000606235 2172 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 Y_RNA.97-201ENST00000363094 102 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 SNORA62.1-201ENST00000364287 154 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 Y_RNA.598-201ENST00000410480 95 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 RPL21P24-201ENST00000413752 448 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC099548.1-201ENST00000421443 426 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.37□□□□□ -2.19
COL5A3P25940 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC008850.1-201ENST00000427546 362 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AL121601.2-201ENST00000438019 707 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC118469.1-201ENST00000442943 488 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 GDI2P2-201ENST00000445131 608 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 RPS15AP27-201ENST00000449183 343 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 KATNBL1P6-201ENST00000453433 915 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.37□□□□□ -2.19
COL5A3P25940 RPL30P5-201ENST00000494923 336 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 RNA5SP384-201ENST00000516615 116 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 DEFB108A-201ENST00000530110 222 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.37□□□□□ -2.19
COL5A3P25940 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A3P25940 MIR3616-201ENST00000584070 92 ntBASIC1.37□□□□□ -2.19
COL5A3P25940 AC119751.7-201ENST00000600494 245 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms