Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FAM92A1P2-202ENST00000504766 877 ntBASIC2.63□□□□□ -1.99
CDH3P22223 MTND3P25-201ENST00000509243 135 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RNU1-86P-201ENST00000516108 154 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RNU6-718P-201ENST00000516166 105 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RNU1-107P-201ENST00000516617 154 ntBASIC2.63□□□□□ -1.99
CDH3P22223 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH3P22223 AC109635.3-201ENST00000529536 185 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.63□□□□□ -1.99
CDH3P22223 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.63□□□□□ -1.99
CDH3P22223 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH3P22223 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH3P22223 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH3P22223 AL049779.4-201ENST00000604500 156 ntBASIC2.63□□□□□ -1.99
CDH3P22223 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH3P22223 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH3P22223 FER-210ENST00000628534 558 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH3P22223 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.63□□□□□ -1.99
CDH3P22223 MIR3688-2-201ENST00000636963 87 ntBASIC2.63□□□□□ -1.99
CDH3P22223 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDH3P22223 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH3P22223 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH3P22223 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH3P22223 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH3P22223 AC062016.1-201ENST00000355719 319 ntBASIC2.62□□□□□ -1.99
CDH3P22223 SNORD14B-201ENST00000364533 90 ntBASIC2.62□□□□□ -1.99
CDH3P22223 RNU4-20P-201ENST00000365601 151 ntBASIC2.62□□□□□ -1.99
CDH3P22223 MIR9-1-201ENST00000385198 89 ntBASIC2.62□□□□□ -1.99
CDH3P22223 SNORD70.1-201ENST00000391007 85 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AL360182.1-201ENST00000397433 468 ntBASIC2.62□□□□□ -1.99
CDH3P22223 RNU2-49P-201ENST00000410666 184 ntBASIC2.62□□□□□ -1.99
CDH3P22223 RNU2-52P-201ENST00000410680 190 ntBASIC2.62□□□□□ -1.99
CDH3P22223 RNU6-1068P-201ENST00000410958 103 ntBASIC2.62□□□□□ -1.99
CDH3P22223 Y_RNA.623-201ENST00000411128 95 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AL353621.1-201ENST00000418219 243 ntBASIC2.62□□□□□ -1.99
CDH3P22223 NUP35P1-201ENST00000422734 947 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH3P22223 ARL5AP4-201ENST00000430731 512 ntBASIC2.62□□□□□ -1.99
CDH3P22223 SEPT14P3-201ENST00000439401 183 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH3P22223 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AL732372.2-207ENST00000445840 183 ntBASIC2.62□□□□□ -1.99
CDH3P22223 HMGN2P10-201ENST00000448085 265 ntBASIC2.62□□□□□ -1.99
CDH3P22223 SEPT14P2-201ENST00000453405 183 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AC026801.1-201ENST00000497178 464 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH3P22223 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CDH3P22223 AC104136.1-201ENST00000512969 394 ntBASIC2.62□□□□□ -1.99
CDH3P22223 SEPT14P4-201ENST00000513445 186 ntBASIC2.62□□□□□ -1.99
CDH3P22223 RNU2-69P-201ENST00000516061 100 ntBASIC2.62□□□□□ -1.99
CDH3P22223 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
CDH3P22223 FO082796.1-201ENST00000523795 183 ntBASIC2.62□□□□□ -1.99
CDH3P22223 BNIP3P6-201ENST00000549284 499 ntBASIC2.62□□□□□ -1.99
CDH3P22223 NACAP3-201ENST00000552100 481 ntBASIC2.62□□□□□ -1.99
CDH3P22223 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH3P22223 MIR4782-201ENST00000577987 79 ntBASIC2.62□□□□□ -1.99
CDH3P22223 MIR5692A1-201ENST00000580523 69 ntBASIC2.62□□□□□ -1.99
CDH3P22223 AC092794.1-201ENST00000612734 582 ntBASIC2.62□□□□□ -1.99
CDH3P22223 uc_338.34-201ENST00000617467 174 ntBASIC2.62□□□□□ -1.99
CDH3P22223 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH3P22223 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDH3P22223 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
CDH3P22223 RNU6-451P-201ENST00000362921 107 ntBASIC2.61□□□□□ -1.99
CDH3P22223 Y_RNA.256-201ENST00000364594 104 ntBASIC2.61□□□□□ -1.99
CDH3P22223 RNU6-1303P-201ENST00000364841 107 ntBASIC2.61□□□□□ -1.99
CDH3P22223 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CDH3P22223 RNU6-38P-201ENST00000384085 107 ntBASIC2.61□□□□□ -1.99
CDH3P22223 RNU6-393P-201ENST00000384475 107 ntBASIC2.61□□□□□ -1.99
CDH3P22223 MIR518D-201ENST00000385014 87 ntBASIC2.61□□□□□ -1.99
CDH3P22223 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDH3P22223 AL606923.1-201ENST00000406616 190 ntBASIC2.61□□□□□ -1.99
CDH3P22223 RNU2-3P-201ENST00000410144 191 ntBASIC2.61□□□□□ -1.99
CDH3P22223 CR769767.1-201ENST00000436337 346 ntBASIC2.61□□□□□ -1.99
CDH3P22223 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH3P22223 MRPL50P4-201ENST00000446432 475 ntBASIC2.61□□□□□ -1.99
CDH3P22223 NDUFB1P2-201ENST00000449477 176 ntBASIC2.61□□□□□ -1.99
CDH3P22223 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.61□□□□□ -1.99
CDH3P22223 RNU6-333P-201ENST00000459117 107 ntBASIC2.61□□□□□ -1.99
CDH3P22223 MTAPP1-201ENST00000489154 819 ntBASIC2.61□□□□□ -1.99
CDH3P22223 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH3P22223 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH3P22223 RNU4-29P-201ENST00000515943 174 ntBASIC2.61□□□□□ -1.99
CDH3P22223 MTND4LP26-201ENST00000518144 282 ntBASIC2.61□□□□□ -1.99
CDH3P22223 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH3P22223 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH3P22223 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH3P22223 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.61□□□□□ -1.99
CDH3P22223 AC021739.1-201ENST00000559631 174 ntBASIC2.61□□□□□ -1.99
CDH3P22223 MTCO3P23-201ENST00000561363 289 ntBASIC2.61□□□□□ -1.99
CDH3P22223 LRRC37A5P-203ENST00000580181 585 ntBASIC2.61□□□□□ -1.99
CDH3P22223 MIR3605-201ENST00000583214 100 ntBASIC2.61□□□□□ -1.99
CDH3P22223 AL355877.2-201ENST00000603670 358 ntBASIC2.61□□□□□ -1.99
CDH3P22223 AC107304.1-201ENST00000604229 296 ntBASIC2.61□□□□□ -1.99
CDH3P22223 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH3P22223 AP003400.5-201ENST00000624827 617 ntBASIC2.61□□□□□ -1.99
CDH3P22223 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CDH3P22223 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CDH3P22223 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
CDH3P22223 MTND4P14-201ENST00000435799 1354 ntBASIC2.61□□□□□ -1.99
CDH3P22223 AL136360.1-201ENST00000503377 1900 ntBASIC2.6□□□□□ -1.99
CDH3P22223 RNY3P3-201ENST00000363816 102 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms