Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.67□□□□□ -1.82
ATF3P18847 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATF3P18847 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATF3P18847 AC010889.1-201ENST00000566193 2666 ntBASIC3.66□□□□□ -1.82
ATF3P18847 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATF3P18847 Y_RNA.295-201ENST00000364918 102 ntBASIC3.66□□□□□ -1.82
ATF3P18847 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATF3P18847 RAP1BP3-201ENST00000407180 549 ntBASIC3.66□□□□□ -1.82
ATF3P18847 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.66□□□□□ -1.82
ATF3P18847 U3.37-201ENST00000408528 213 ntBASIC3.66□□□□□ -1.82
ATF3P18847 OR9R1P-201ENST00000412200 877 ntBASIC3.66□□□□□ -1.82
ATF3P18847 RPL7P10-201ENST00000417407 739 ntBASIC3.66□□□□□ -1.82
ATF3P18847 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.66□□□□□ -1.82
ATF3P18847 AL121601.2-201ENST00000438019 707 ntBASIC3.66□□□□□ -1.82
ATF3P18847 HIGD1AP2-201ENST00000446367 280 ntBASIC3.66□□□□□ -1.82
ATF3P18847 DYNLL1P5-201ENST00000467158 270 ntBASIC3.66□□□□□ -1.82
ATF3P18847 AC092989.1-201ENST00000481235 277 ntBASIC3.66□□□□□ -1.82
ATF3P18847 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.66□□□□□ -1.82
ATF3P18847 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.66□□□□□ -1.82
ATF3P18847 OR11H5P-201ENST00000554039 926 ntBASIC3.66□□□□□ -1.82
ATF3P18847 AL121821.2-201ENST00000556081 394 ntBASIC3.66□□□□□ -1.82
ATF3P18847 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.66□□□□□ -1.82
ATF3P18847 AC010525.2-201ENST00000590920 195 ntBASIC3.66□□□□□ -1.82
ATF3P18847 AC002064.3-201ENST00000623448 346 ntBASIC3.66□□□□□ -1.82
ATF3P18847 SCARNA4-202ENST00000625402 129 ntBASIC3.66□□□□□ -1.82
ATF3P18847 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.66□□□□□ -1.82
ATF3P18847 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATF3P18847 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATF3P18847 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATF3P18847 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATF3P18847 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ATF3P18847 RNA5SP99-201ENST00000364020 114 ntBASIC3.65□□□□□ -1.83
ATF3P18847 RNU6-1303P-201ENST00000364841 107 ntBASIC3.65□□□□□ -1.83
ATF3P18847 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
ATF3P18847 RNU6-72P-201ENST00000384285 79 ntBASIC3.65□□□□□ -1.83
ATF3P18847 AL358075.3-201ENST00000426289 226 ntBASIC3.65□□□□□ -1.83
ATF3P18847 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF3P18847 AL161651.1-201ENST00000440882 223 ntBASIC3.65□□□□□ -1.83
ATF3P18847 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.65□□□□□ -1.83
ATF3P18847 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF3P18847 AC092001.1-201ENST00000453012 261 ntBASIC3.65□□□□□ -1.83
ATF3P18847 Y_RNA.654-201ENST00000497848 106 ntBASIC3.65□□□□□ -1.83
ATF3P18847 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATF3P18847 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF3P18847 AC113155.1-201ENST00000511141 769 ntBASIC3.65□□□□□ -1.83
ATF3P18847 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.65□□□□□ -1.83
ATF3P18847 SNORA64.4-201ENST00000516632 81 ntBASIC3.65□□□□□ -1.83
ATF3P18847 AC090115.3-201ENST00000553218 849 ntBASIC3.65□□□□□ -1.83
ATF3P18847 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF3P18847 AC007151.1-201ENST00000572774 483 ntBASIC3.65□□□□□ -1.83
ATF3P18847 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF3P18847 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF3P18847 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.65□□□□□ -1.83
ATF3P18847 SNORA50A-202ENST00000629536 136 ntBASIC3.65□□□□□ -1.83
ATF3P18847 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATF3P18847 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATF3P18847 ZNF519P1-201ENST00000449011 1626 ntBASIC3.64□□□□□ -1.83
ATF3P18847 SNORD56.3-201ENST00000363507 71 ntBASIC3.64□□□□□ -1.83
ATF3P18847 MIR27B-201ENST00000385129 97 ntBASIC3.64□□□□□ -1.83
ATF3P18847 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.64□□□□□ -1.83
ATF3P18847 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.64□□□□□ -1.83
ATF3P18847 RN7SKP285-201ENST00000410137 318 ntBASIC3.64□□□□□ -1.83
ATF3P18847 RNA5SP118-201ENST00000410385 109 ntBASIC3.64□□□□□ -1.83
ATF3P18847 RNU6-373P-201ENST00000411247 98 ntBASIC3.64□□□□□ -1.83
ATF3P18847 RPLP0P7-201ENST00000416050 667 ntBASIC3.64□□□□□ -1.83
ATF3P18847 AC016831.2-201ENST00000417179 352 ntBASIC3.64□□□□□ -1.83
ATF3P18847 DPH3P2-201ENST00000422618 250 ntBASIC3.64□□□□□ -1.83
ATF3P18847 HMGN2P3-201ENST00000433603 273 ntBASIC3.64□□□□□ -1.83
ATF3P18847 ERLEC1P1-201ENST00000433806 578 ntBASIC3.64□□□□□ -1.83
ATF3P18847 HMGN2P5-201ENST00000436882 273 ntBASIC3.64□□□□□ -1.83
ATF3P18847 AC233279.1-201ENST00000455300 423 ntBASIC3.64□□□□□ -1.83
ATF3P18847 RPL21P93-201ENST00000480465 489 ntBASIC3.64□□□□□ -1.83
ATF3P18847 AC006483.1-201ENST00000487308 313 ntBASIC3.64□□□□□ -1.83
ATF3P18847 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF3P18847 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.64□□□□□ -1.83
ATF3P18847 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.64□□□□□ -1.83
ATF3P18847 RNU6-189P-201ENST00000516120 101 ntBASIC3.64□□□□□ -1.83
ATF3P18847 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.64□□□□□ -1.83
ATF3P18847 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF3P18847 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF3P18847 UCA1.1-201ENST00000620952 75 ntBASIC3.64□□□□□ -1.83
ATF3P18847 AC092435.3-201ENST00000565538 3654 ntBASIC3.64□□□□□ -1.83
ATF3P18847 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATF3P18847 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
ATF3P18847 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF3P18847 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF3P18847 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
ATF3P18847 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF3P18847 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF3P18847 Y_RNA.324-201ENST00000365165 102 ntBASIC3.63□□□□□ -1.83
ATF3P18847 RNU6-1280P-201ENST00000365211 107 ntBASIC3.63□□□□□ -1.83
ATF3P18847 RNU1-100P-201ENST00000365255 165 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF3P18847 RNU4-26P-201ENST00000410270 107 ntBASIC3.63□□□□□ -1.83
ATF3P18847 RNA5SP247-201ENST00000411181 105 ntBASIC3.63□□□□□ -1.83
ATF3P18847 POLHP1-201ENST00000411806 470 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AC245054.2-201ENST00000415639 319 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF3P18847 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF3P18847 AL356320.1-201ENST00000429616 163 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms