Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SNORD116-20-201ENST00000384529 92 ntBASIC2.36□□□□□ -2.03
VCLP18206 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.36□□□□□ -2.03
VCLP18206 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.36□□□□□ -2.03
VCLP18206 UBE2V1P10-201ENST00000414685 269 ntBASIC2.36□□□□□ -2.03
VCLP18206 EIF4EP4-201ENST00000424916 578 ntBASIC2.36□□□□□ -2.03
VCLP18206 CALM1P1-201ENST00000442082 433 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.36□□□□□ -2.03
VCLP18206 AL031659.1-201ENST00000447075 539 ntBASIC2.36□□□□□ -2.03
VCLP18206 RNU6-956P-201ENST00000458868 103 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC090515.1-201ENST00000465295 476 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC117503.1-201ENST00000472241 394 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.36□□□□□ -2.03
VCLP18206 AP000873.5-201ENST00000533906 236 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC105137.2-201ENST00000569073 466 ntBASIC2.36□□□□□ -2.03
VCLP18206 MIR3913-1-201ENST00000577744 102 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC008945.2-201ENST00000606056 604 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC093788.1-201ENST00000609356 927 ntBASIC2.36□□□□□ -2.03
VCLP18206 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.36□□□□□ -2.03
VCLP18206 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC026585.1-201ENST00000619582 524 ntBASIC2.36□□□□□ -2.03
VCLP18206 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.36□□□□□ -2.03
VCLP18206 AC009161.2-201ENST00000624626 138 ntBASIC2.36□□□□□ -2.03
VCLP18206 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCLP18206 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCLP18206 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.35□□□□□ -2.03
VCLP18206 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCLP18206 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
VCLP18206 MIR21-201ENST00000362134 72 ntBASIC2.35□□□□□ -2.03
VCLP18206 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
VCLP18206 RNU6-282P-201ENST00000365357 103 ntBASIC2.35□□□□□ -2.03
VCLP18206 RNU6-487P-201ENST00000365430 104 ntBASIC2.35□□□□□ -2.03
VCLP18206 RNU4-48P-201ENST00000365559 182 ntBASIC2.35□□□□□ -2.03
VCLP18206 RNU6-550P-201ENST00000391057 101 ntBASIC2.35□□□□□ -2.03
VCLP18206 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.35□□□□□ -2.03
VCLP18206 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.35□□□□□ -2.03
VCLP18206 WARS2P1-201ENST00000429678 537 ntBASIC2.35□□□□□ -2.03
VCLP18206 AC000111.3-201ENST00000433478 193 ntBASIC2.35□□□□□ -2.03
VCLP18206 AL596276.1-201ENST00000434465 418 ntBASIC2.35□□□□□ -2.03
VCLP18206 USP9YP29-201ENST00000445112 563 ntBASIC2.35□□□□□ -2.03
VCLP18206 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.35□□□□□ -2.03
VCLP18206 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
VCLP18206 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.35□□□□□ -2.03
VCLP18206 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.35□□□□□ -2.03
VCLP18206 RPL23AP94-201ENST00000512518 302 ntBASIC2.35□□□□□ -2.03
VCLP18206 AC074344.1-201ENST00000512823 224 ntBASIC2.35□□□□□ -2.03
VCLP18206 AC109329.1-201ENST00000518744 317 ntBASIC2.35□□□□□ -2.03
VCLP18206 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
VCLP18206 AC136619.2-201ENST00000563361 631 ntBASIC2.35□□□□□ -2.03
VCLP18206 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.35□□□□□ -2.03
VCLP18206 AL391840.1-201ENST00000571144 367 ntBASIC2.35□□□□□ -2.03
VCLP18206 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.35□□□□□ -2.03
VCLP18206 AC025811.1-201ENST00000604312 472 ntBASIC2.35□□□□□ -2.03
VCLP18206 AL355297.2-201ENST00000604792 129 ntBASIC2.35□□□□□ -2.03
VCLP18206 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
VCLP18206 U4atac.1-201ENST00000618345 95 ntBASIC2.35□□□□□ -2.03
VCLP18206 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
VCLP18206 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCLP18206 SNORA6-201ENST00000384033 151 ntBASIC2.34□□□□□ -2.03
VCLP18206 RNU6-45P-201ENST00000384471 107 ntBASIC2.34□□□□□ -2.03
VCLP18206 RNU1-57P-201ENST00000384491 166 ntBASIC2.34□□□□□ -2.03
VCLP18206 RN7SKP158-201ENST00000410453 326 ntBASIC2.34□□□□□ -2.03
VCLP18206 MTND2P4-201ENST00000445034 1004 ntBASIC2.34□□□□□ -2.03
VCLP18206 AC079448.1-201ENST00000449377 373 ntBASIC2.34□□□□□ -2.03
VCLP18206 C1DP4-201ENST00000455429 424 ntBASIC2.34□□□□□ -2.03
VCLP18206 AL162395.1-201ENST00000457882 422 ntBASIC2.34□□□□□ -2.03
VCLP18206 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.34□□□□□ -2.03
VCLP18206 MTND3P25-201ENST00000509243 135 ntBASIC2.34□□□□□ -2.03
VCLP18206 AC026436.1-201ENST00000510537 270 ntBASIC2.34□□□□□ -2.03
VCLP18206 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.34□□□□□ -2.03
VCLP18206 RNU1-86P-201ENST00000516108 154 ntBASIC2.34□□□□□ -2.03
VCLP18206 RNU1-107P-201ENST00000516617 154 ntBASIC2.34□□□□□ -2.03
VCLP18206 AP002963.1-201ENST00000530590 184 ntBASIC2.34□□□□□ -2.03
VCLP18206 CBX3P7-201ENST00000532876 502 ntBASIC2.34□□□□□ -2.03
VCLP18206 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.34□□□□□ -2.03
VCLP18206 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.34□□□□□ -2.03
VCLP18206 MTCYBP33-201ENST00000575007 1130 ntBASIC2.34□□□□□ -2.03
VCLP18206 AC073410.2-201ENST00000603240 332 ntBASIC2.34□□□□□ -2.03
VCLP18206 AC103810.6-201ENST00000606708 136 ntBASIC2.34□□□□□ -2.03
VCLP18206 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VCLP18206 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
VCLP18206 AC009233.1-201ENST00000616477 371 ntBASIC2.34□□□□□ -2.03
VCLP18206 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.34□□□□□ -2.03
VCLP18206 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.34□□□□□ -2.03
VCLP18206 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
VCLP18206 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.04
VCLP18206 RNU6-1010P-201ENST00000362757 107 ntBASIC2.33□□□□□ -2.04
VCLP18206 RNU6-1029P-201ENST00000384109 107 ntBASIC2.33□□□□□ -2.04
VCLP18206 SNORA67.4-201ENST00000384688 142 ntBASIC2.33□□□□□ -2.04
VCLP18206 AL135786.1-201ENST00000415892 214 ntBASIC2.33□□□□□ -2.04
VCLP18206 HMGB1P31-201ENST00000437242 427 ntBASIC2.33□□□□□ -2.04
VCLP18206 AL161788.1-201ENST00000441805 169 ntBASIC2.33□□□□□ -2.04
VCLP18206 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.33□□□□□ -2.04
VCLP18206 AC124916.1-201ENST00000444020 547 ntBASIC2.33□□□□□ -2.04
VCLP18206 MTND1P18-201ENST00000448191 573 ntBASIC2.33□□□□□ -2.04
VCLP18206 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
VCLP18206 KLF3P2-201ENST00000465138 268 ntBASIC2.33□□□□□ -2.04
VCLP18206 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
VCLP18206 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.33□□□□□ -2.04
VCLP18206 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms