Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.55□□□□□ -2
ERCC2P18074 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.55□□□□□ -2
ERCC2P18074 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.55□□□□□ -2
ERCC2P18074 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.55□□□□□ -2
ERCC2P18074 RPL7P20-201ENST00000520308 745 ntBASIC2.55□□□□□ -2
ERCC2P18074 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.55□□□□□ -2
ERCC2P18074 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.55□□□□□ -2
ERCC2P18074 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
ERCC2P18074 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.55□□□□□ -2
ERCC2P18074 AL121917.1-203ENST00000605534 577 ntBASIC2.55□□□□□ -2
ERCC2P18074 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.55□□□□□ -2
ERCC2P18074 AC096772.1-201ENST00000609146 564 ntBASIC2.55□□□□□ -2
ERCC2P18074 AC093788.1-201ENST00000609356 927 ntBASIC2.55□□□□□ -2
ERCC2P18074 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
ERCC2P18074 AL449363.1-201ENST00000617815 186 ntBASIC2.55□□□□□ -2
ERCC2P18074 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
ERCC2P18074 RMST_7.1-201ENST00000621935 268 ntBASIC2.55□□□□□ -2
ERCC2P18074 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.55□□□□□ -2
ERCC2P18074 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ERCC2P18074 AL139276.1-201ENST00000311910 1001 ntBASIC2.54□□□□□ -2
ERCC2P18074 OR56A5-201ENST00000340110 738 ntBASIC2.54□□□□□ -2
ERCC2P18074 RNU6-552P-201ENST00000362869 119 ntBASIC2.54□□□□□ -2
ERCC2P18074 Y_RNA.381-201ENST00000365666 102 ntBASIC2.54□□□□□ -2
ERCC2P18074 RNU6-1127P-201ENST00000384580 107 ntBASIC2.54□□□□□ -2
ERCC2P18074 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
ERCC2P18074 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
ERCC2P18074 RNU2-66P-201ENST00000410650 161 ntBASIC2.54□□□□□ -2
ERCC2P18074 RNU4-55P-201ENST00000410731 137 ntBASIC2.54□□□□□ -2
ERCC2P18074 UBE2V1P10-201ENST00000414685 269 ntBASIC2.54□□□□□ -2
ERCC2P18074 CYCSP48-201ENST00000417124 323 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC138623.1-201ENST00000418060 216 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.54□□□□□ -2
ERCC2P18074 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.54□□□□□ -2
ERCC2P18074 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.54□□□□□ -2
ERCC2P18074 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.54□□□□□ -2
ERCC2P18074 MTCYBP8-201ENST00000422855 651 ntBASIC2.54□□□□□ -2
ERCC2P18074 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.54□□□□□ -2
ERCC2P18074 AC236972.1-201ENST00000433225 199 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.54□□□□□ -2
ERCC2P18074 AC006026.2-201ENST00000457376 180 ntBASIC2.54□□□□□ -2
ERCC2P18074 SCARNA18-201ENST00000459004 134 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC090515.1-201ENST00000465295 476 ntBASIC2.54□□□□□ -2
ERCC2P18074 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC140059.1-201ENST00000489238 361 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.54□□□□□ -2
ERCC2P18074 LRRC34P2-201ENST00000514850 553 ntBASIC2.54□□□□□ -2
ERCC2P18074 SNORA31.23-201ENST00000517219 133 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC024909.2-201ENST00000553035 286 ntBASIC2.54□□□□□ -2
ERCC2P18074 AC136619.2-201ENST00000563361 631 ntBASIC2.54□□□□□ -2
ERCC2P18074 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.54□□□□□ -2
ERCC2P18074 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
ERCC2P18074 NDUFA8P1-201ENST00000605525 367 ntBASIC2.54□□□□□ -2
ERCC2P18074 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ERCC2P18074 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.53□□□□□ -2
ERCC2P18074 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERCC2P18074 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
ERCC2P18074 RNU1-72P-201ENST00000362976 153 ntBASIC2.53□□□□□ -2
ERCC2P18074 SNORD114-19-201ENST00000363072 75 ntBASIC2.53□□□□□ -2
ERCC2P18074 Y_RNA.324-201ENST00000365165 102 ntBASIC2.53□□□□□ -2
ERCC2P18074 RNU6-517P-201ENST00000384362 110 ntBASIC2.53□□□□□ -2
ERCC2P18074 SNORA16.2-201ENST00000390991 127 ntBASIC2.53□□□□□ -2
ERCC2P18074 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
ERCC2P18074 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.53□□□□□ -2
ERCC2P18074 AL365400.1-201ENST00000431854 640 ntBASIC2.53□□□□□ -2
ERCC2P18074 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.53□□□□□ -2
ERCC2P18074 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
ERCC2P18074 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
ERCC2P18074 SNRPFP3-201ENST00000457792 225 ntBASIC2.53□□□□□ -2
ERCC2P18074 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
ERCC2P18074 AP001025.1-201ENST00000486139 332 ntBASIC2.53□□□□□ -2
ERCC2P18074 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.53□□□□□ -2
ERCC2P18074 MTCO3P7-201ENST00000510008 774 ntBASIC2.53□□□□□ -2
ERCC2P18074 AC090136.1-201ENST00000520009 240 ntBASIC2.53□□□□□ -2
ERCC2P18074 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.53□□□□□ -2
ERCC2P18074 MIR3162-201ENST00000581818 82 ntBASIC2.53□□□□□ -2
ERCC2P18074 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
ERCC2P18074 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
ERCC2P18074 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
ERCC2P18074 AC103591.3-201ENST00000608684 209 ntBASIC2.53□□□□□ -2
ERCC2P18074 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
ERCC2P18074 HAUS6P2-201ENST00000433254 2404 ntBASIC2.53□□□□□ -2
ERCC2P18074 MTND5P26-201ENST00000426018 1752 ntBASIC2.53□□□□□ -2
ERCC2P18074 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2
ERCC2P18074 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
ERCC2P18074 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
ERCC2P18074 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.52□□□□□ -2.01
ERCC2P18074 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
ERCC2P18074 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ERCC2P18074 RNU6-78P-201ENST00000362897 107 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 SNORA38-201ENST00000363946 132 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 RNU6-487P-201ENST00000365430 104 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 RNU6-996P-201ENST00000365438 107 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 OR5H15-201ENST00000383696 930 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 RNU6-259P-201ENST00000383999 107 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 RNU6-434P-201ENST00000384376 107 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 Y_RNA.510-201ENST00000384511 114 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ERCC2P18074 RNU6-1158P-201ENST00000391167 107 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 AC074117.2-201ENST00000417130 397 ntBASIC2.52□□□□□ -2.01
ERCC2P18074 EIF4EP4-201ENST00000424916 578 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms