Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DOBP13765 MIR3944-201ENST00000581277 108 ntBASIC2.69□□□□□ -1.98
HLA-DOBP13765 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DOBP13765 AC008121.1-201ENST00000603244 268 ntBASIC2.69□□□□□ -1.98
HLA-DOBP13765 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DOBP13765 ELOCP5-201ENST00000604924 333 ntBASIC2.69□□□□□ -1.98
HLA-DOBP13765 AC007179.3-201ENST00000604976 235 ntBASIC2.69□□□□□ -1.98
HLA-DOBP13765 AC016727.1-205ENST00000605437 569 ntBASIC2.69□□□□□ -1.98
HLA-DOBP13765 AC010378.1-201ENST00000619270 362 ntBASIC2.69□□□□□ -1.98
HLA-DOBP13765 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HLA-DOBP13765 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DOBP13765 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 MIR208A-201ENST00000362287 71 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-37P-201ENST00000362692 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-11P-201ENST00000364234 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 Y_RNA.813-201ENST00000364639 102 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-7-201ENST00000364784 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-8-201ENST00000365467 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 Z98749.2-208ENST00000381646 500 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-25P-201ENST00000383873 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-1-201ENST00000383898 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 Y_RNA.431-201ENST00000384086 102 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-48P-201ENST00000384161 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-36P-201ENST00000384172 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-4P-201ENST00000384205 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-5P-201ENST00000384238 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-72P-201ENST00000384285 79 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-3P-201ENST00000384314 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 Y_RNA.482-201ENST00000384377 111 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-16P-201ENST00000384385 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-15P-201ENST00000384534 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-2-201ENST00000384627 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-29P-201ENST00000384637 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-95P-201ENST00000384697 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-9-201ENST00000384776 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-33P-201ENST00000384793 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 MIR591-201ENST00000385290 95 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-1106P-201ENST00000390845 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 SNORA48.8-201ENST00000391324 134 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 U3.37-201ENST00000408528 213 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNA5SP274-201ENST00000410484 108 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-1077P-201ENST00000410506 102 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RN7SKP220-201ENST00000410611 288 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 SNORD56-201ENST00000413522 71 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC010099.1-201ENST00000455434 375 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 BTF3P15-201ENST00000455606 336 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 Y_RNA.632-201ENST00000459189 102 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 snoU13.28-201ENST00000459235 104 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC117440.1-201ENST00000474107 571 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RN7SL633P-201ENST00000488974 297 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC113155.1-201ENST00000511141 769 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-559P-201ENST00000516151 98 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 AP000867.2-201ENST00000532468 320 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 RNU6-6P-201ENST00000606623 107 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC096577.2-201ENST00000611455 153 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC090574.1-201ENST00000623186 233 ntBASIC2.68□□□□□ -1.98
HLA-DOBP13765 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DOBP13765 AC010680.1-201ENST00000590024 3590 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 AC007256.1-201ENST00000392253 2765 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DOBP13765 Y_RNA.58-201ENST00000362807 102 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 Y_RNA.154-201ENST00000363624 102 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 SNORD46.1-201ENST00000364139 104 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 RNY3P1-201ENST00000365085 102 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 RNY3-201ENST00000365484 102 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DOBP13765 Y_RNA.490-201ENST00000384413 102 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 SNORD73A-201ENST00000386062 65 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 AL445529.1-201ENST00000398713 389 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DOBP13765 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DOBP13765 AL590632.1-201ENST00000424289 371 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DOBP13765 HMGN2P20-201ENST00000437531 273 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 AC098831.1-201ENST00000440661 216 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DOBP13765 AC006026.2-201ENST00000457376 180 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 RN7SL283P-201ENST00000489055 303 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 HMGN1P13-201ENST00000505795 138 ntBASIC2.67□□□□□ -1.98
HLA-DOBP13765 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms