Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC104651.1-201ENST00000427559 735 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AC016925.1-201ENST00000458303 298 ntBASIC-0.42□□□□□ -2.48
VCANP13611 SCARNA18-201ENST00000459004 134 ntBASIC-0.42□□□□□ -2.48
VCANP13611 RPL30P7-201ENST00000479312 323 ntBASIC-0.42□□□□□ -2.48
VCANP13611 RPL30P11-201ENST00000495304 339 ntBASIC-0.42□□□□□ -2.48
VCANP13611 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AC090330.1-201ENST00000588646 764 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.42□□□□□ -2.48
VCANP13611 AC092192.1-201ENST00000633154 1018 ntBASIC-0.42□□□□□ -2.48
VCANP13611 SNORD115-24-201ENST00000363528 82 ntBASIC-0.42□□□□□ -2.48
VCANP13611 MIR644A-201ENST00000385262 94 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC-0.42□□□□□ -2.48
VCANP13611 RAC1P8-201ENST00000427086 527 ntBASIC-0.42□□□□□ -2.48
VCANP13611 snoU109.2-201ENST00000459316 135 ntBASIC-0.42□□□□□ -2.48
VCANP13611 SNORA31.8-201ENST00000516327 108 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AC087272.1-201ENST00000523624 533 ntBASIC-0.42□□□□□ -2.48
VCANP13611 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
VCANP13611 RNA5SP219-201ENST00000390940 113 ntBASIC-0.42□□□□□ -2.48
VCANP13611 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AL590632.1-201ENST00000424289 371 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AC098614.2-201ENST00000426040 255 ntBASIC-0.42□□□□□ -2.48
VCANP13611 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.42□□□□□ -2.48
VCANP13611 RNU6-1320P-201ENST00000390838 107 ntBASIC-0.43□□□□□ -2.48
VCANP13611 RNU6-1269P-201ENST00000391139 107 ntBASIC-0.43□□□□□ -2.48
VCANP13611 DHFRP6-201ENST00000401776 268 ntBASIC-0.43□□□□□ -2.48
VCANP13611 RNU6-193P-201ENST00000410977 107 ntBASIC-0.43□□□□□ -2.48
VCANP13611 ELOCP6-201ENST00000429066 328 ntBASIC-0.43□□□□□ -2.48
VCANP13611 ELOCP12-201ENST00000458706 328 ntBASIC-0.43□□□□□ -2.48
VCANP13611 RNU6-599P-201ENST00000459383 107 ntBASIC-0.43□□□□□ -2.48
VCANP13611 RNU6-1193P-201ENST00000459461 107 ntBASIC-0.43□□□□□ -2.48
VCANP13611 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.43□□□□□ -2.48
VCANP13611 RNU6-368P-201ENST00000620928 107 ntBASIC-0.43□□□□□ -2.48
VCANP13611 RNU6-538P-201ENST00000622329 107 ntBASIC-0.43□□□□□ -2.48
VCANP13611 AC068880.5-201ENST00000624331 290 ntBASIC-0.43□□□□□ -2.48
VCANP13611 MIR1295B-201ENST00000636144 60 ntBASIC-0.43□□□□□ -2.48
VCANP13611 AL049641.1-201ENST00000441055 1948 ntBASIC-0.43□□□□□ -2.48
VCANP13611 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
VCANP13611 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
VCANP13611 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC-0.43□□□□□ -2.48
VCANP13611 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.43□□□□□ -2.48
VCANP13611 BNIP3P31-201ENST00000604515 566 ntBASIC-0.43□□□□□ -2.48
VCANP13611 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC-0.43□□□□□ -2.48
VCANP13611 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.43□□□□□ -2.48
VCANP13611 SNORA75.3-201ENST00000391231 150 ntBASIC-0.43□□□□□ -2.48
VCANP13611 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.43□□□□□ -2.48
VCANP13611 AC040926.1-201ENST00000530195 238 ntBASIC-0.43□□□□□ -2.48
VCANP13611 AC023157.2-201ENST00000540596 141 ntBASIC-0.43□□□□□ -2.48
VCANP13611 AC090888.1-201ENST00000561335 1141 ntBASIC-0.43□□□□□ -2.48
VCANP13611 SNRPGP15-201ENST00000600149 222 ntBASIC-0.43□□□□□ -2.48
VCANP13611 SNORA18.1-201ENST00000363418 128 ntBASIC-0.44□□□□□ -2.48
VCANP13611 RNU4-84P-201ENST00000364200 139 ntBASIC-0.44□□□□□ -2.48
VCANP13611 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.44□□□□□ -2.48
VCANP13611 RPS15AP27-201ENST00000449183 343 ntBASIC-0.44□□□□□ -2.48
VCANP13611 MTCO3P35-201ENST00000485582 781 ntBASIC-0.44□□□□□ -2.48
VCANP13611 SNORA40.12-201ENST00000516329 111 ntBASIC-0.44□□□□□ -2.48
VCANP13611 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.44□□□□□ -2.48
VCANP13611 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.44□□□□□ -2.48
VCANP13611 AC092447.9-201ENST00000603395 144 ntBASIC-0.44□□□□□ -2.48
VCANP13611 AL356157.2-201ENST00000605122 111 ntBASIC-0.44□□□□□ -2.48
VCANP13611 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC-0.44□□□□□ -2.48
VCANP13611 BX664727.1-201ENST00000416024 466 ntBASIC-0.44□□□□□ -2.48
VCANP13611 TRAPPC2P4-201ENST00000421750 331 ntBASIC-0.44□□□□□ -2.48
VCANP13611 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.44□□□□□ -2.48
VCANP13611 RNVU1-2-201ENST00000516326 135 ntBASIC-0.44□□□□□ -2.48
VCANP13611 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC-0.44□□□□□ -2.48
VCANP13611 MIR520F-201ENST00000384824 87 ntBASIC-0.45□□□□□ -2.48
VCANP13611 EIF4EP2-201ENST00000422816 654 ntBASIC-0.45□□□□□ -2.48
VCANP13611 MTCO1P20-201ENST00000425366 358 ntBASIC-0.45□□□□□ -2.48
VCANP13611 RPS15AP9-201ENST00000439856 381 ntBASIC-0.45□□□□□ -2.48
VCANP13611 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC-0.45□□□□□ -2.48
VCANP13611 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC-0.45□□□□□ -2.48
VCANP13611 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.45□□□□□ -2.48
VCANP13611 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AC022254.1-201ENST00000567857 235 ntBASIC-0.45□□□□□ -2.48
VCANP13611 U3.13-201ENST00000364804 214 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.45□□□□□ -2.48
VCANP13611 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC-0.45□□□□□ -2.48
VCANP13611 MTCYBP16-201ENST00000509187 1129 ntBASIC-0.45□□□□□ -2.48
VCANP13611 RNU6-902P-201ENST00000517212 91 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AC068790.6-201ENST00000602558 258 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AL078604.3-201ENST00000615580 211 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AL590240.4-201ENST00000616908 390 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AC114482.1-201ENST00000418010 247 ntBASIC-0.45□□□□□ -2.48
VCANP13611 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.45□□□□□ -2.48
VCANP13611 snoU13.9-201ENST00000458927 103 ntBASIC-0.45□□□□□ -2.48
VCANP13611 RPS3AP17-201ENST00000472594 777 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AC098869.1-201ENST00000481627 292 ntBASIC-0.45□□□□□ -2.48
VCANP13611 AC008498.1-201ENST00000613012 531 ntBASIC-0.45□□□□□ -2.48
VCANP13611 RNA5SP327-201ENST00000362494 101 ntBASIC-0.46□□□□□ -2.48
VCANP13611 GTF2IP3-201ENST00000433887 494 ntBASIC-0.46□□□□□ -2.48
VCANP13611 SETP11-201ENST00000473027 690 ntBASIC-0.46□□□□□ -2.48
VCANP13611 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
VCANP13611 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.46□□□□□ -2.48
VCANP13611 RNY4-201ENST00000516507 96 ntBASIC-0.46□□□□□ -2.48
VCANP13611 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.46□□□□□ -2.48
VCANP13611 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
VCANP13611 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
VCANP13611 MIR103A1-201ENST00000362165 78 ntBASIC-0.46□□□□□ -2.48
VCANP13611 SNORA42.1-201ENST00000363515 137 ntBASIC-0.46□□□□□ -2.48
VCANP13611 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms