Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.8□□□□□ -1.8
COL6A2P12110 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.8□□□□□ -1.8
COL6A2P12110 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.8□□□□□ -1.8
COL6A2P12110 SNORA43.2-201ENST00000516652 128 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RN7SKP289-201ENST00000517244 295 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AP004607.1-201ENST00000524456 203 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL6A2P12110 AL590705.4-201ENST00000532209 134 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.8□□□□□ -1.8
COL6A2P12110 AL110115.1-201ENST00000614396 364 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 AC243829.7-201ENST00000633081 225 ntBASIC3.8□□□□□ -1.8
COL6A2P12110 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL6A2P12110 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL6A2P12110 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.8□□□□□ -1.8
COL6A2P12110 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
COL6A2P12110 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COL6A2P12110 AC091152.2-201ENST00000591628 2569 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL6A2P12110 RNU6-874P-201ENST00000362390 105 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 RNU6-942P-201ENST00000363002 107 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL6A2P12110 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 Y_RNA.592-201ENST00000410274 109 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 AC092423.1-201ENST00000430165 186 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 TBCAP1-201ENST00000436520 327 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 DYNLT3P2-201ENST00000442517 295 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 AC124916.1-201ENST00000444020 547 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.79□□□□□ -1.8
COL6A2P12110 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.79□□□□□ -1.8
COL6A2P12110 AC026402.1-201ENST00000513642 170 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 RNA5SP164-201ENST00000516533 110 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 SNORA31.18-201ENST00000517043 134 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 RNU6-1271P-201ENST00000517049 105 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.79□□□□□ -1.8
COL6A2P12110 AC109329.1-201ENST00000518744 317 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.79□□□□□ -1.8
COL6A2P12110 H3F3AP1-201ENST00000559984 334 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 AC104581.2-201ENST00000572227 430 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 MIR3160-1-201ENST00000577972 85 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.79□□□□□ -1.8
COL6A2P12110 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.79□□□□□ -1.8
COL6A2P12110 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.79□□□□□ -1.8
COL6A2P12110 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.79□□□□□ -1.8
COL6A2P12110 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.79□□□□□ -1.8
COL6A2P12110 AC062037.2-201ENST00000610137 73 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.79□□□□□ -1.8
COL6A2P12110 XIST_intron.1-201ENST00000619444 68 ntBASIC3.79□□□□□ -1.8
COL6A2P12110 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.79□□□□□ -1.8
COL6A2P12110 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
COL6A2P12110 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL6A2P12110 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
COL6A2P12110 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
COL6A2P12110 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.79□□□□□ -1.8
COL6A2P12110 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL6A2P12110 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL6A2P12110 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.78□□□□□ -1.8
COL6A2P12110 Y_RNA.214-201ENST00000364201 112 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 Y_RNA.476-201ENST00000384347 108 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 MIR591-201ENST00000385290 95 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 SNORA57.1-201ENST00000391227 145 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 SNORA48.7-201ENST00000391302 135 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 HMGN2P30-201ENST00000423237 256 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.78□□□□□ -1.8
COL6A2P12110 OR2AQ1P-201ENST00000451972 200 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 RNU7-169P-201ENST00000459456 61 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 RNU6-408P-201ENST00000515910 100 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 RNU6-1143P-201ENST00000516125 104 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.78□□□□□ -1.8
COL6A2P12110 AMZ2P1-203ENST00000565833 850 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.78□□□□□ -1.8
COL6A2P12110 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.78□□□□□ -1.8
COL6A2P12110 MIR6134-201ENST00000617606 109 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 AL159153.1-201ENST00000619688 317 ntBASIC3.78□□□□□ -1.8
COL6A2P12110 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL6A2P12110 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL6A2P12110 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL6A2P12110 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL6A2P12110 AP001486.2-201ENST00000561652 5113 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COL6A2P12110 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL6A2P12110 RNA5SP130-201ENST00000364431 114 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 RNA5SP97-201ENST00000365006 84 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 RNU6-658P-201ENST00000384606 106 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
COL6A2P12110 BTF3L4P2-201ENST00000392798 346 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 RNU6-847P-201ENST00000411115 108 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 RPL37P4-201ENST00000448908 268 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.77□□□□□ -1.81
COL6A2P12110 RN7SL330P-201ENST00000469709 307 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 AC026784.1-201ENST00000507986 352 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 SNORA25.11-201ENST00000515935 105 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 RNY3P15-201ENST00000516297 97 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 MRPL49P2-201ENST00000521066 465 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.77□□□□□ -1.81
COL6A2P12110 AC060766.3-201ENST00000591442 263 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 AC090425.1-201ENST00000610007 140 ntBASIC3.77□□□□□ -1.81
COL6A2P12110 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.77□□□□□ -1.81
COL6A2P12110 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms