Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC092125.1-201ENST00000562568 1995 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 RPL21P90-201ENST00000415692 466 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 TOMM22P2-201ENST00000430735 237 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 GTF2IP3-201ENST00000433887 494 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 AC010409.1-201ENST00000487382 476 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 MTCYBP43-201ENST00000513621 740 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 RNU6-1183P-201ENST00000517054 60 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.81□□□□□ -2.28
FREM3P0C091 AC122134.1-202ENST00000569111 1201 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 AL353997.4-201ENST00000586196 166 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.81□□□□□ -2.28
FREM3P0C091 NDUFA8P1-201ENST00000605525 367 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 AL022345.1-201ENST00000607292 135 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 AC009269.6-201ENST00000621778 588 ntBASIC0.81□□□□□ -2.28
FREM3P0C091 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.81□□□□□ -2.28
FREM3P0C091 RBBP8P1-201ENST00000449447 1844 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 HAUS6P2-201ENST00000433254 2404 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
FREM3P0C091 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
FREM3P0C091 MIR424-201ENST00000362227 98 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU6-288P-201ENST00000363690 104 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.8□□□□□ -2.28
FREM3P0C091 AC004941.2-201ENST00000427009 228 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.8□□□□□ -2.28
FREM3P0C091 MTND1P31-201ENST00000449206 961 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 FABP5P15-201ENST00000453566 214 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AC008379.1-201ENST00000463655 464 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
FREM3P0C091 SNORA31.16-201ENST00000516773 139 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 SNORA31.19-201ENST00000517079 126 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU6-586P-201ENST00000517265 104 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
FREM3P0C091 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.8□□□□□ -2.28
FREM3P0C091 SUB1P4-201ENST00000566062 339 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AC012414.6-201ENST00000568241 401 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.8□□□□□ -2.28
FREM3P0C091 AC010900.2-201ENST00000604508 210 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 OR5T3-201ENST00000303059 1023 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU1-23P-201ENST00000363361 144 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 Y_RNA.393-201ENST00000383936 102 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU6-1105P-201ENST00000384774 107 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU1-78P-201ENST00000391248 165 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNA5SP501-201ENST00000410990 112 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU6-575P-201ENST00000411326 105 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.8□□□□□ -2.28
FREM3P0C091 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.8□□□□□ -2.28
FREM3P0C091 ARPC3P5-201ENST00000448802 534 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU6-775P-201ENST00000459318 96 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 TPT1P8-201ENST00000510120 555 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 RNU6-667P-201ENST00000517186 102 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.8□□□□□ -2.28
FREM3P0C091 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.8□□□□□ -2.28
FREM3P0C091 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.8□□□□□ -2.28
FREM3P0C091 SNRPGP1-201ENST00000553864 222 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AL512347.1-201ENST00000566420 503 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AC098614.4-201ENST00000607601 462 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AC093788.1-201ENST00000609356 927 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 U1.36-201ENST00000620684 176 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 AP003476.1-201ENST00000623984 516 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 U6.99-201ENST00000637524 83 ntBASIC0.8□□□□□ -2.28
FREM3P0C091 Y_RNA.255-201ENST00000364581 97 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
FREM3P0C091 FTH1P15-201ENST00000406984 280 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.79□□□□□ -2.28
FREM3P0C091 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.79□□□□□ -2.28
FREM3P0C091 UBE2V1P4-201ENST00000425374 344 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.79□□□□□ -2.28
FREM3P0C091 SEPT14P24-201ENST00000447236 180 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 FCF1P6-201ENST00000456841 595 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.79□□□□□ -2.28
FREM3P0C091 AC018868.1-201ENST00000491307 315 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 RPF2P2-201ENST00000504693 896 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.79□□□□□ -2.28
FREM3P0C091 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.79□□□□□ -2.28
FREM3P0C091 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.79□□□□□ -2.28
FREM3P0C091 AL445435.1-201ENST00000604232 665 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 Z82243.1-201ENST00000609432 473 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC004908.3-201ENST00000610248 625 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.79□□□□□ -2.28
FREM3P0C091 MIR6134-201ENST00000617606 109 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC099654.9-201ENST00000637055 678 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 CDR1-202ENST00000625883 1485 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 Y_RNA.67-201ENST00000362870 100 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 BTF3L4P2-201ENST00000392798 346 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 RNU2-48P-201ENST00000410694 191 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 RAC1P6-201ENST00000423911 575 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC008267.5-201ENST00000424928 265 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 ISCA1P1-201ENST00000426679 387 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC118469.1-201ENST00000442943 488 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.79□□□□□ -2.28
FREM3P0C091 AC093809.1-201ENST00000509155 340 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC024589.1-201ENST00000512207 263 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.79□□□□□ -2.28
FREM3P0C091 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.79□□□□□ -2.28
FREM3P0C091 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
FREM3P0C091 AL161798.1-201ENST00000604630 131 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms