Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 CBX3P9-201ENST00000402326 552 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 AL606923.1-201ENST00000406616 190 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 SNORD23.1-201ENST00000408212 104 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 EDDM3CP-201ENST00000415977 425 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 AC073415.1-201ENST00000449240 153 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 MTND2P33-201ENST00000506452 1031 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 AC079140.5-201ENST00000507882 310 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 AC109479.2-201ENST00000517842 174 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGB1P09429 AC009063.1-201ENST00000563342 702 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGB1P09429 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGB1P09429 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB1P09429 AL354685.2-201ENST00000448218 1447 ntBASIC3.52□□□□□ -1.85
HMGB1P09429 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB1P09429 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGB1P09429 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
HMGB1P09429 RNU6-428P-201ENST00000362942 107 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HMGB1P09429 AL606489.2-201ENST00000433886 234 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 BX510359.1-201ENST00000456973 237 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 snoU13.14-201ENST00000459372 104 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGB1P09429 AC097462.2-201ENST00000504623 481 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 SNORA25.17-201ENST00000517184 124 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 MTND4P7-201ENST00000523876 130 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 AC022880.1-201ENST00000534017 973 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGB1P09429 AC091135.1-201ENST00000585943 307 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 AC025165.5-201ENST00000602802 578 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 AL136363.2-201ENST00000604173 851 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 uc_338.34-201ENST00000617467 174 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 AC139792.3-201ENST00000623525 224 ntBASIC3.51□□□□□ -1.85
HMGB1P09429 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB1P09429 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P09429 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HMGB1P09429 AF274854.1-201ENST00000413236 615 ntBASIC3.5□□□□□ -1.85
HMGB1P09429 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB1P09429 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB1P09429 AL353752.1-201ENST00000454946 260 ntBASIC3.5□□□□□ -1.85
HMGB1P09429 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.5□□□□□ -1.85
HMGB1P09429 RNU6-405P-201ENST00000516637 110 ntBASIC3.5□□□□□ -1.85
HMGB1P09429 AC069113.1-201ENST00000517763 267 ntBASIC3.5□□□□□ -1.85
HMGB1P09429 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB1P09429 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB1P09429 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB1P09429 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB1P09429 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P09429 AC004777.1-201ENST00000624317 287 ntBASIC3.5□□□□□ -1.85
HMGB1P09429 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB1P09429 RNA5SP374-201ENST00000362939 125 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 RNU6-525P-201ENST00000363685 104 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 SNORA9.2-201ENST00000365361 133 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 RNU6-851P-201ENST00000384565 107 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGB1P09429 RNU2-32P-201ENST00000411193 191 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 AL663109.1-201ENST00000411498 844 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGB1P09429 RNU7-167P-201ENST00000459160 62 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 RPL30P1-201ENST00000488676 339 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 AC091133.4-201ENST00000511142 308 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 RNU6-826P-201ENST00000516827 104 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB1P09429 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGB1P09429 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGB1P09429 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB1P09429 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGB1P09429 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB1P09429 AC087683.1-201ENST00000591187 441 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 AL031274.2-201ENST00000599419 203 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 APOOP1-201ENST00000604695 592 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 AC004908.3-201ENST00000610248 625 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 AC107871.2-201ENST00000612894 502 ntBASIC3.49□□□□□ -1.85
HMGB1P09429 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HMGB1P09429 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB1P09429 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGB1P09429 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB1P09429 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB1P09429 Y_RNA.409-201ENST00000383990 98 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 RNU6-1222P-201ENST00000384615 107 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGB1P09429 AL121601.2-201ENST00000438019 707 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGB1P09429 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGB1P09429 CACYBPP2-201ENST00000453625 678 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 RNU7-180P-201ENST00000459240 63 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 AC008571.1-201ENST00000467232 300 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 AC018868.1-201ENST00000491307 315 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 TBCAP3-201ENST00000512475 312 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 RNU6-667P-201ENST00000517186 102 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 AC107953.1-201ENST00000522216 297 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 AP000763.2-201ENST00000540641 163 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB1P09429 AC007179.3-201ENST00000604976 235 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 AC063943.3-201ENST00000615562 356 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 AL159153.1-201ENST00000619688 317 ntBASIC3.48□□□□□ -1.85
HMGB1P09429 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB1P09429 AC096644.4-201ENST00000563417 2912 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms