Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CXCL1P09341 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CXCL1P09341 SNORA7.1-201ENST00000363750 139 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 MIR19A-201ENST00000384878 82 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 MIR301A-201ENST00000385261 86 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 RNU6-360P-201ENST00000390944 104 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.74□□□□□ -2.29
CXCL1P09341 RPL21P90-201ENST00000415692 466 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.74□□□□□ -2.29
CXCL1P09341 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.74□□□□□ -2.29
CXCL1P09341 MRPS36P1-201ENST00000421291 307 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.74□□□□□ -2.29
CXCL1P09341 RAC1P6-201ENST00000423911 575 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.74□□□□□ -2.29
CXCL1P09341 AL669831.1-202ENST00000428504 417 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.74□□□□□ -2.29
CXCL1P09341 SNORA3.4-201ENST00000515969 96 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 RNU6-751P-201ENST00000516382 101 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 RNU6-965P-201ENST00000516721 96 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.74□□□□□ -2.29
CXCL1P09341 DNAJC19P9-201ENST00000555084 351 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.74□□□□□ -2.29
CXCL1P09341 AC079148.1-201ENST00000565944 819 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 MIR3912-201ENST00000577566 105 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.74□□□□□ -2.29
CXCL1P09341 BNIP3P30-201ENST00000601184 574 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AL358072.1-201ENST00000604156 575 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AC090186.1-201ENST00000605991 572 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.74□□□□□ -2.29
CXCL1P09341 AC130454.1-201ENST00000622948 401 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 AC022513.1-201ENST00000624512 117 ntBASIC0.74□□□□□ -2.29
CXCL1P09341 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
CXCL1P09341 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CXCL1P09341 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.73□□□□□ -2.29
CXCL1P09341 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CXCL1P09341 RPL17P50-201ENST00000396131 546 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 RNU2-23P-201ENST00000410545 195 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.73□□□□□ -2.29
CXCL1P09341 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.73□□□□□ -2.29
CXCL1P09341 FO393414.1-201ENST00000428697 1184 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AL591704.1-201ENST00000432574 275 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.73□□□□□ -2.29
CXCL1P09341 MTCYBP42-201ENST00000444653 1130 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AL096829.2-201ENST00000446582 742 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AL353718.1-201ENST00000451028 517 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 OR2AQ1P-201ENST00000451972 200 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 RNU1-131P-201ENST00000458943 161 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AC093852.1-201ENST00000503587 266 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 UBL5P1-201ENST00000507979 193 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.73□□□□□ -2.29
CXCL1P09341 AC112198.4-201ENST00000515450 351 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 RNU7-40P-201ENST00000516397 64 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.73□□□□□ -2.29
CXCL1P09341 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CXCL1P09341 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.73□□□□□ -2.29
CXCL1P09341 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.73□□□□□ -2.29
CXCL1P09341 CR383656.8-201ENST00000549046 145 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.73□□□□□ -2.29
CXCL1P09341 AC137800.2-201ENST00000574375 120 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AL158827.2-201ENST00000602494 330 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 PCMTD1P7-201ENST00000634506 357 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 AL691447.3-201ENST00000635020 330 ntBASIC0.73□□□□□ -2.29
CXCL1P09341 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CXCL1P09341 Y_RNA.40-201ENST00000362645 93 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 RNU6-457P-201ENST00000363999 107 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 RPS12P24-201ENST00000412619 387 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 AL161935.2-201ENST00000414627 60 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 UBE2V1P10-201ENST00000414685 269 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CXCL1P09341 OOSP1P1-201ENST00000423265 274 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 RPS6P15-201ENST00000431996 751 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL1P09341 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL1P09341 SNRPEP7-201ENST00000438350 220 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL1P09341 HMGN2P18-201ENST00000450680 270 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL1P09341 RNU6-64P-201ENST00000517119 105 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 AC104417.1-201ENST00000523974 751 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 CENPUP1-201ENST00000526649 1202 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL1P09341 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.72□□□□□ -2.29
CXCL1P09341 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL1P09341 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.72□□□□□ -2.29
CXCL1P09341 AL731537.2-201ENST00000561565 951 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.72□□□□□ -2.29
CXCL1P09341 AL590240.4-201ENST00000616908 390 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.72□□□□□ -2.29
CXCL1P09341 MIR1248-201ENST00000629190 106 ntBASIC0.72□□□□□ -2.29
CXCL1P09341 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CXCL1P09341 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
CXCL1P09341 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CXCL1P09341 RNU6-858P-201ENST00000362436 107 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 RNU6-942P-201ENST00000363002 107 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 RNU6-743P-201ENST00000364151 106 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms