Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.45□□□□□ -2.02
VIMP08670 AC091133.4-201ENST00000511142 308 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC096725.1-201ENST00000514266 313 ntBASIC2.45□□□□□ -2.02
VIMP08670 RN7SKP219-201ENST00000516825 296 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC078814.3-201ENST00000553036 491 ntBASIC2.45□□□□□ -2.02
VIMP08670 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC136619.2-201ENST00000563361 631 ntBASIC2.45□□□□□ -2.02
VIMP08670 MTATP6P3-201ENST00000581686 676 ntBASIC2.45□□□□□ -2.02
VIMP08670 AL121917.1-203ENST00000605534 577 ntBASIC2.45□□□□□ -2.02
VIMP08670 MIR92B-201ENST00000607575 96 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC096772.1-201ENST00000609146 564 ntBASIC2.45□□□□□ -2.02
VIMP08670 U4.3-201ENST00000621047 82 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC012640.5-201ENST00000623897 319 ntBASIC2.45□□□□□ -2.02
VIMP08670 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.44□□□□□ -2.02
VIMP08670 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.44□□□□□ -2.02
VIMP08670 SNORD114-19-201ENST00000363072 75 ntBASIC2.44□□□□□ -2.02
VIMP08670 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
VIMP08670 SNORD46.1-201ENST00000364139 104 ntBASIC2.44□□□□□ -2.02
VIMP08670 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VIMP08670 SNORA51.11-201ENST00000384442 131 ntBASIC2.44□□□□□ -2.02
VIMP08670 RNU6-393P-201ENST00000384475 107 ntBASIC2.44□□□□□ -2.02
VIMP08670 SNORD70.1-201ENST00000391007 85 ntBASIC2.44□□□□□ -2.02
VIMP08670 RNU2-29P-201ENST00000410423 189 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC003685.2-201ENST00000422795 395 ntBASIC2.44□□□□□ -2.02
VIMP08670 EIF4EP4-201ENST00000424916 578 ntBASIC2.44□□□□□ -2.02
VIMP08670 AL365400.1-201ENST00000431854 640 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.44□□□□□ -2.02
VIMP08670 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.44□□□□□ -2.02
VIMP08670 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.44□□□□□ -2.02
VIMP08670 MTCO2P18-201ENST00000457151 658 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC006026.2-201ENST00000457376 180 ntBASIC2.44□□□□□ -2.02
VIMP08670 RNU7-63P-201ENST00000459054 62 ntBASIC2.44□□□□□ -2.02
VIMP08670 GMFBP1-201ENST00000467831 427 ntBASIC2.44□□□□□ -2.02
VIMP08670 HMGB1P29-201ENST00000505659 499 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.44□□□□□ -2.02
VIMP08670 AC008526.1-201ENST00000509149 338 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC108043.1-201ENST00000512696 574 ntBASIC2.44□□□□□ -2.02
VIMP08670 RNU6-405P-201ENST00000516637 110 ntBASIC2.44□□□□□ -2.02
VIMP08670 RPL7P20-201ENST00000520308 745 ntBASIC2.44□□□□□ -2.02
VIMP08670 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.44□□□□□ -2.02
VIMP08670 AC243972.3-201ENST00000539655 198 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC009063.1-201ENST00000563342 702 ntBASIC2.44□□□□□ -2.02
VIMP08670 MIR1254-2-201ENST00000579553 63 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC087683.1-201ENST00000591187 441 ntBASIC2.44□□□□□ -2.02
VIMP08670 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
VIMP08670 RMST_7.1-201ENST00000621935 268 ntBASIC2.44□□□□□ -2.02
VIMP08670 AC005609.4-201ENST00000625071 447 ntBASIC2.44□□□□□ -2.02
VIMP08670 HAUS6P2-201ENST00000433254 2404 ntBASIC2.44□□□□□ -2.02
VIMP08670 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VIMP08670 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VIMP08670 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.43□□□□□ -2.02
VIMP08670 Y_RNA.1-201ENST00000352915 104 ntBASIC2.43□□□□□ -2.02
VIMP08670 RNU6-552P-201ENST00000362869 119 ntBASIC2.43□□□□□ -2.02
VIMP08670 Y_RNA.381-201ENST00000365666 102 ntBASIC2.43□□□□□ -2.02
VIMP08670 SNORA6-201ENST00000384033 151 ntBASIC2.43□□□□□ -2.02
VIMP08670 RNU6-1127P-201ENST00000384580 107 ntBASIC2.43□□□□□ -2.02
VIMP08670 RNU6-903P-201ENST00000391270 109 ntBASIC2.43□□□□□ -2.02
VIMP08670 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.43□□□□□ -2.02
VIMP08670 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.43□□□□□ -2.02
VIMP08670 BTF3L4P1-201ENST00000413813 468 ntBASIC2.43□□□□□ -2.02
VIMP08670 AL353193.1-201ENST00000421444 268 ntBASIC2.43□□□□□ -2.02
VIMP08670 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.43□□□□□ -2.02
VIMP08670 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.43□□□□□ -2.02
VIMP08670 SCARNA18-201ENST00000459004 134 ntBASIC2.43□□□□□ -2.02
VIMP08670 AP001025.1-201ENST00000486139 332 ntBASIC2.43□□□□□ -2.02
VIMP08670 MTCO3P7-201ENST00000510008 774 ntBASIC2.43□□□□□ -2.02
VIMP08670 LRRC34P2-201ENST00000514850 553 ntBASIC2.43□□□□□ -2.02
VIMP08670 SNORA31.23-201ENST00000517219 133 ntBASIC2.43□□□□□ -2.02
VIMP08670 AP003392.2-201ENST00000527269 208 ntBASIC2.43□□□□□ -2.02
VIMP08670 CBX3P7-201ENST00000532876 502 ntBASIC2.43□□□□□ -2.02
VIMP08670 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VIMP08670 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.43□□□□□ -2.02
VIMP08670 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.43□□□□□ -2.02
VIMP08670 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.43□□□□□ -2.02
VIMP08670 AC091805.2-201ENST00000603848 235 ntBASIC2.43□□□□□ -2.02
VIMP08670 AL138963.2-201ENST00000605137 226 ntBASIC2.43□□□□□ -2.02
VIMP08670 AC096577.2-201ENST00000611455 153 ntBASIC2.43□□□□□ -2.02
VIMP08670 AC009233.1-201ENST00000616477 371 ntBASIC2.43□□□□□ -2.02
VIMP08670 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.43□□□□□ -2.02
VIMP08670 AC048344.4-201ENST00000619744 527 ntBASIC2.43□□□□□ -2.02
VIMP08670 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.43□□□□□ -2.02
VIMP08670 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VIMP08670 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.43□□□□□ -2.02
VIMP08670 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
VIMP08670 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.42□□□□□ -2.02
VIMP08670 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.42□□□□□ -2.02
VIMP08670 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.42□□□□□ -2.02
VIMP08670 RNU6-78P-201ENST00000362897 107 ntBASIC2.42□□□□□ -2.02
VIMP08670 SNORD114-30-201ENST00000364448 72 ntBASIC2.42□□□□□ -2.02
VIMP08670 Y_RNA.324-201ENST00000365165 102 ntBASIC2.42□□□□□ -2.02
VIMP08670 RNU6-487P-201ENST00000365430 104 ntBASIC2.42□□□□□ -2.02
VIMP08670 RNU6-1042P-201ENST00000384204 107 ntBASIC2.42□□□□□ -2.02
VIMP08670 RNU6-622P-201ENST00000384272 103 ntBASIC2.42□□□□□ -2.02
VIMP08670 RNU6-301P-201ENST00000384277 107 ntBASIC2.42□□□□□ -2.02
VIMP08670 SNORA16.2-201ENST00000390991 127 ntBASIC2.42□□□□□ -2.02
VIMP08670 UBA52P6-201ENST00000399822 382 ntBASIC2.42□□□□□ -2.02
VIMP08670 RNU4-55P-201ENST00000410731 137 ntBASIC2.42□□□□□ -2.02
VIMP08670 AL663109.1-201ENST00000411498 844 ntBASIC2.42□□□□□ -2.02
VIMP08670 AC074117.2-201ENST00000417130 397 ntBASIC2.42□□□□□ -2.02
VIMP08670 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms