Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CR381653.2-201ENST00000624041 768 ntBASIC2.84□□□□□ -1.95
RB1P06400 AC022418.1-201ENST00000624118 445 ntBASIC2.84□□□□□ -1.95
RB1P06400 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.84□□□□□ -1.95
RB1P06400 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RB1P06400 RNU6-434P-201ENST00000384376 107 ntBASIC2.83□□□□□ -1.96
RB1P06400 RNU6-748P-201ENST00000384648 107 ntBASIC2.83□□□□□ -1.96
RB1P06400 MIR147B-201ENST00000390185 80 ntBASIC2.83□□□□□ -1.96
RB1P06400 SNORA16.2-201ENST00000390991 127 ntBASIC2.83□□□□□ -1.96
RB1P06400 SNORD70.1-201ENST00000391007 85 ntBASIC2.83□□□□□ -1.96
RB1P06400 CYCSP33-201ENST00000414485 327 ntBASIC2.83□□□□□ -1.96
RB1P06400 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.83□□□□□ -1.96
RB1P06400 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.83□□□□□ -1.96
RB1P06400 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.83□□□□□ -1.96
RB1P06400 snoU109.2-201ENST00000459316 135 ntBASIC2.83□□□□□ -1.96
RB1P06400 AIG1P1-201ENST00000503376 148 ntBASIC2.83□□□□□ -1.96
RB1P06400 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.83□□□□□ -1.96
RB1P06400 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.83□□□□□ -1.96
RB1P06400 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.83□□□□□ -1.96
RB1P06400 AP004607.1-201ENST00000524456 203 ntBASIC2.83□□□□□ -1.96
RB1P06400 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.83□□□□□ -1.96
RB1P06400 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RB1P06400 HMGB1P33-201ENST00000563485 527 ntBASIC2.83□□□□□ -1.96
RB1P06400 AC103810.1-201ENST00000579873 453 ntBASIC2.83□□□□□ -1.96
RB1P06400 MIR5583-1-201ENST00000580941 59 ntBASIC2.83□□□□□ -1.96
RB1P06400 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.83□□□□□ -1.96
RB1P06400 AC093788.1-201ENST00000609356 927 ntBASIC2.83□□□□□ -1.96
RB1P06400 AC069234.5-201ENST00000611056 416 ntBASIC2.83□□□□□ -1.96
RB1P06400 AC010378.1-201ENST00000619270 362 ntBASIC2.83□□□□□ -1.96
RB1P06400 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.83□□□□□ -1.96
RB1P06400 U4.3-201ENST00000621047 82 ntBASIC2.83□□□□□ -1.96
RB1P06400 MIR7515-201ENST00000637837 67 ntBASIC2.83□□□□□ -1.96
RB1P06400 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RB1P06400 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.82□□□□□ -1.96
RB1P06400 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RB1P06400 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.82□□□□□ -1.96
RB1P06400 SNORA69-201ENST00000383895 132 ntBASIC2.82□□□□□ -1.96
RB1P06400 MIR27B-201ENST00000385129 97 ntBASIC2.82□□□□□ -1.96
RB1P06400 RNU6-780P-201ENST00000391030 104 ntBASIC2.82□□□□□ -1.96
RB1P06400 CIR1P3-201ENST00000405137 479 ntBASIC2.82□□□□□ -1.96
RB1P06400 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.82□□□□□ -1.96
RB1P06400 AL135786.1-201ENST00000415892 214 ntBASIC2.82□□□□□ -1.96
RB1P06400 RPLP0P7-201ENST00000416050 667 ntBASIC2.82□□□□□ -1.96
RB1P06400 PGBD4P6-201ENST00000421501 610 ntBASIC2.82□□□□□ -1.96
RB1P06400 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.82□□□□□ -1.96
RB1P06400 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.82□□□□□ -1.96
RB1P06400 MTND1P34-201ENST00000438556 671 ntBASIC2.82□□□□□ -1.96
RB1P06400 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.82□□□□□ -1.96
RB1P06400 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.82□□□□□ -1.96
RB1P06400 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.82□□□□□ -1.96
RB1P06400 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.82□□□□□ -1.96
RB1P06400 RPL9P33-201ENST00000484311 566 ntBASIC2.82□□□□□ -1.96
RB1P06400 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.82□□□□□ -1.96
RB1P06400 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.82□□□□□ -1.96
RB1P06400 RNU2-69P-201ENST00000516061 100 ntBASIC2.82□□□□□ -1.96
RB1P06400 SNORA31.6-201ENST00000516241 130 ntBASIC2.82□□□□□ -1.96
RB1P06400 Y_RNA.687-201ENST00000516558 91 ntBASIC2.82□□□□□ -1.96
RB1P06400 RNU6-314P-201ENST00000516574 104 ntBASIC2.82□□□□□ -1.96
RB1P06400 AL512360.1-201ENST00000555346 234 ntBASIC2.82□□□□□ -1.96
RB1P06400 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.82□□□□□ -1.96
RB1P06400 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.82□□□□□ -1.96
RB1P06400 OR1M4P-201ENST00000589199 287 ntBASIC2.82□□□□□ -1.96
RB1P06400 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
RB1P06400 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.82□□□□□ -1.96
RB1P06400 AF250324.2-201ENST00000608299 610 ntBASIC2.82□□□□□ -1.96
RB1P06400 AC011890.2-201ENST00000613393 294 ntBASIC2.82□□□□□ -1.96
RB1P06400 AL031601.2-202ENST00000622650 282 ntBASIC2.82□□□□□ -1.96
RB1P06400 SCARNA4-202ENST00000625402 129 ntBASIC2.82□□□□□ -1.96
RB1P06400 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.82□□□□□ -1.96
RB1P06400 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RB1P06400 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.82□□□□□ -1.96
RB1P06400 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RB1P06400 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.82□□□□□ -1.96
RB1P06400 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RB1P06400 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RB1P06400 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
RB1P06400 RNU6-1303P-201ENST00000364841 107 ntBASIC2.81□□□□□ -1.96
RB1P06400 Y_RNA.372-201ENST00000365599 102 ntBASIC2.81□□□□□ -1.96
RB1P06400 MIR181A1-201ENST00000385026 110 ntBASIC2.81□□□□□ -1.96
RB1P06400 AL606923.1-201ENST00000406616 190 ntBASIC2.81□□□□□ -1.96
RB1P06400 FTH1P15-201ENST00000406984 280 ntBASIC2.81□□□□□ -1.96
RB1P06400 BTF3P7-201ENST00000407097 488 ntBASIC2.81□□□□□ -1.96
RB1P06400 RAP1BP3-201ENST00000407180 549 ntBASIC2.81□□□□□ -1.96
RB1P06400 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.81□□□□□ -1.96
RB1P06400 RNA5SP425-201ENST00000410336 112 ntBASIC2.81□□□□□ -1.96
RB1P06400 RNU4-53P-201ENST00000410828 140 ntBASIC2.81□□□□□ -1.96
RB1P06400 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 Z98742.3-201ENST00000418637 326 ntBASIC2.81□□□□□ -1.96
RB1P06400 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
RB1P06400 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 RPS15AP7-201ENST00000439294 405 ntBASIC2.81□□□□□ -1.96
RB1P06400 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 PRPS1P1-201ENST00000445305 876 ntBASIC2.81□□□□□ -1.96
RB1P06400 HIGD1AP2-201ENST00000446367 280 ntBASIC2.81□□□□□ -1.96
RB1P06400 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 AC003982.1-202ENST00000469928 248 ntBASIC2.81□□□□□ -1.96
RB1P06400 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
RB1P06400 MRPL42P6-201ENST00000486397 371 ntBASIC2.81□□□□□ -1.96
RB1P06400 MTAPP1-201ENST00000489154 819 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms