Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BTF3P7-201ENST00000407097 488 ntBASIC1.66□□□□□ -2.14
CD74P04233 RN7SKP223-201ENST00000410582 62 ntBASIC1.66□□□□□ -2.14
CD74P04233 RNU2-8P-201ENST00000410727 190 ntBASIC1.66□□□□□ -2.14
CD74P04233 Z98742.3-201ENST00000418637 326 ntBASIC1.66□□□□□ -2.14
CD74P04233 AL353689.1-201ENST00000438895 199 ntBASIC1.66□□□□□ -2.14
CD74P04233 RPS15AP9-201ENST00000439856 381 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC009238.1-201ENST00000442165 424 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC009237.6-201ENST00000446969 424 ntBASIC1.66□□□□□ -2.14
CD74P04233 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.66□□□□□ -2.14
CD74P04233 SNRPGP9-201ENST00000456025 225 ntBASIC1.66□□□□□ -2.14
CD74P04233 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.66□□□□□ -2.14
CD74P04233 AC112771.1-201ENST00000463581 102 ntBASIC1.66□□□□□ -2.14
CD74P04233 MTND3P7-201ENST00000474435 343 ntBASIC1.66□□□□□ -2.14
CD74P04233 RPL36AP48-201ENST00000485521 314 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC018437.1-201ENST00000492214 406 ntBASIC1.66□□□□□ -2.14
CD74P04233 CKS1BP2-201ENST00000497342 240 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC117522.1-201ENST00000509821 380 ntBASIC1.66□□□□□ -2.14
CD74P04233 SMURF2P1-201ENST00000514992 481 ntBASIC1.66□□□□□ -2.14
CD74P04233 SCARNA24.1-201ENST00000516465 137 ntBASIC1.66□□□□□ -2.14
CD74P04233 RNU2-44P-201ENST00000516795 194 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.66□□□□□ -2.14
CD74P04233 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.66□□□□□ -2.14
CD74P04233 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.66□□□□□ -2.14
CD74P04233 AC135279.1-201ENST00000543493 504 ntBASIC1.66□□□□□ -2.14
CD74P04233 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.66□□□□□ -2.14
CD74P04233 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.66□□□□□ -2.14
CD74P04233 AC137800.2-201ENST00000574375 120 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC012213.3-201ENST00000577199 777 ntBASIC1.66□□□□□ -2.14
CD74P04233 AL138963.2-201ENST00000605137 226 ntBASIC1.66□□□□□ -2.14
CD74P04233 AL670379.4-201ENST00000605279 254 ntBASIC1.66□□□□□ -2.14
CD74P04233 AL121992.2-201ENST00000606262 256 ntBASIC1.66□□□□□ -2.14
CD74P04233 AL451064.1-201ENST00000607718 471 ntBASIC1.66□□□□□ -2.14
CD74P04233 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.66□□□□□ -2.14
CD74P04233 AC019226.2-201ENST00000625973 424 ntBASIC1.66□□□□□ -2.14
CD74P04233 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CD74P04233 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CD74P04233 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
CD74P04233 Z75746.1-201ENST00000440243 2080 ntBASIC1.65□□□□□ -2.14
CD74P04233 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CD74P04233 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CD74P04233 Y_RNA.22-201ENST00000362492 102 ntBASIC1.65□□□□□ -2.15
CD74P04233 RNU4-21P-201ENST00000362802 126 ntBASIC1.65□□□□□ -2.15
CD74P04233 MIR518D-201ENST00000385014 87 ntBASIC1.65□□□□□ -2.15
CD74P04233 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
CD74P04233 AL356432.1-201ENST00000405809 419 ntBASIC1.65□□□□□ -2.15
CD74P04233 SNORA11.4-201ENST00000408823 129 ntBASIC1.65□□□□□ -2.15
CD74P04233 HMGN1P14-201ENST00000412459 517 ntBASIC1.65□□□□□ -2.15
CD74P04233 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 MTND2P18-201ENST00000419962 1030 ntBASIC1.65□□□□□ -2.15
CD74P04233 AL160275.3-201ENST00000423876 471 ntBASIC1.65□□□□□ -2.15
CD74P04233 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 MED13P1-201ENST00000428342 171 ntBASIC1.65□□□□□ -2.15
CD74P04233 AL139415.2-201ENST00000431968 163 ntBASIC1.65□□□□□ -2.15
CD74P04233 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.65□□□□□ -2.15
CD74P04233 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.65□□□□□ -2.15
CD74P04233 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.65□□□□□ -2.15
CD74P04233 AL022238.1-201ENST00000442557 355 ntBASIC1.65□□□□□ -2.15
CD74P04233 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CD74P04233 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.65□□□□□ -2.15
CD74P04233 UBL5P3-201ENST00000475112 231 ntBASIC1.65□□□□□ -2.15
CD74P04233 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 RPS29P21-201ENST00000496272 170 ntBASIC1.65□□□□□ -2.15
CD74P04233 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.65□□□□□ -2.15
CD74P04233 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.65□□□□□ -2.15
CD74P04233 Vault.3-201ENST00000516676 95 ntBASIC1.65□□□□□ -2.15
CD74P04233 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 DUXAP5-201ENST00000529668 529 ntBASIC1.65□□□□□ -2.15
CD74P04233 CBX3P7-201ENST00000532876 502 ntBASIC1.65□□□□□ -2.15
CD74P04233 AC092325.1-201ENST00000566449 554 ntBASIC1.65□□□□□ -2.15
CD74P04233 MIR1273D-201ENST00000577266 86 ntBASIC1.65□□□□□ -2.15
CD74P04233 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.65□□□□□ -2.15
CD74P04233 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CD74P04233 AL603839.4-201ENST00000624658 1005 ntBASIC1.65□□□□□ -2.15
CD74P04233 AL157786.1-207ENST00000627771 695 ntBASIC1.65□□□□□ -2.15
CD74P04233 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CD74P04233 AC006020.1-201ENST00000420179 1854 ntBASIC1.65□□□□□ -2.15
CD74P04233 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
CD74P04233 RNU6-169P-201ENST00000365336 107 ntBASIC1.64□□□□□ -2.15
CD74P04233 RNU6-748P-201ENST00000384648 107 ntBASIC1.64□□□□□ -2.15
CD74P04233 RNU6-1179P-201ENST00000384667 107 ntBASIC1.64□□□□□ -2.15
CD74P04233 RNY3P10-201ENST00000384764 102 ntBASIC1.64□□□□□ -2.15
CD74P04233 FTH1P15-201ENST00000406984 280 ntBASIC1.64□□□□□ -2.15
CD74P04233 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CD74P04233 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.64□□□□□ -2.15
CD74P04233 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.64□□□□□ -2.15
CD74P04233 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.64□□□□□ -2.15
CD74P04233 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.64□□□□□ -2.15
CD74P04233 AC073614.1-201ENST00000438690 650 ntBASIC1.64□□□□□ -2.15
CD74P04233 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.64□□□□□ -2.15
CD74P04233 AC010095.1-201ENST00000443543 144 ntBASIC1.64□□□□□ -2.15
CD74P04233 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.64□□□□□ -2.15
CD74P04233 AL136380.1-201ENST00000447970 162 ntBASIC1.64□□□□□ -2.15
CD74P04233 AL353705.4-201ENST00000449661 238 ntBASIC1.64□□□□□ -2.15
CD74P04233 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.64□□□□□ -2.15
CD74P04233 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.64□□□□□ -2.15
CD74P04233 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms