Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MIR3921-201ENST00000577308 85 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AP000811.1-201ENST00000603803 651 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AP005229.2-201ENST00000609980 697 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AL132822.1-201ENST00000617063 513 ntBASIC-0.06□□□□□ -2.42
APOBP04114 SNORD12-201ENST00000391002 90 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.06□□□□□ -2.42
APOBP04114 AC074198.2-201ENST00000508153 258 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AC090142.3-201ENST00000519012 385 ntBASIC-0.06□□□□□ -2.42
APOBP04114 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.06□□□□□ -2.42
APOBP04114 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
APOBP04114 AC090625.1-201ENST00000357130 210 ntBASIC-0.07□□□□□ -2.42
APOBP04114 MIRLET7D-201ENST00000362263 87 ntBASIC-0.07□□□□□ -2.42
APOBP04114 RNU6-945P-201ENST00000383947 107 ntBASIC-0.07□□□□□ -2.42
APOBP04114 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOBP04114 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOBP04114 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.07□□□□□ -2.42
APOBP04114 AL049830.1-201ENST00000468034 425 ntBASIC-0.07□□□□□ -2.42
APOBP04114 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOBP04114 SNORA40.12-201ENST00000516329 111 ntBASIC-0.07□□□□□ -2.42
APOBP04114 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOBP04114 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOBP04114 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.07□□□□□ -2.42
APOBP04114 SNORD114-3-201ENST00000364969 75 ntBASIC-0.07□□□□□ -2.42
APOBP04114 MTCO2P12-201ENST00000427426 682 ntBASIC-0.07□□□□□ -2.42
APOBP04114 snoU13.25-201ENST00000458945 104 ntBASIC-0.07□□□□□ -2.42
APOBP04114 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.07□□□□□ -2.42
APOBP04114 RNF138P1-201ENST00000502765 546 ntBASIC-0.07□□□□□ -2.42
APOBP04114 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.07□□□□□ -2.42
APOBP04114 AC008562.1-201ENST00000521763 330 ntBASIC-0.07□□□□□ -2.42
APOBP04114 AC006199.1-201ENST00000548728 219 ntBASIC-0.07□□□□□ -2.42
APOBP04114 RAC1P9-201ENST00000604990 392 ntBASIC-0.07□□□□□ -2.42
APOBP04114 MIR6134-201ENST00000617606 109 ntBASIC-0.07□□□□□ -2.42
APOBP04114 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.07□□□□□ -2.42
APOBP04114 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.07□□□□□ -2.42
APOBP04114 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.07□□□□□ -2.42
APOBP04114 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.07□□□□□ -2.42
APOBP04114 AL353691.1-201ENST00000451332 387 ntBASIC-0.07□□□□□ -2.42
APOBP04114 HMGN1P12-201ENST00000499125 195 ntBASIC-0.07□□□□□ -2.42
APOBP04114 RNU6-138P-201ENST00000515952 107 ntBASIC-0.07□□□□□ -2.42
APOBP04114 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.08□□□□□ -2.42
APOBP04114 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.08□□□□□ -2.42
APOBP04114 AC010631.1-201ENST00000474150 156 ntBASIC-0.08□□□□□ -2.42
APOBP04114 RPL7P43-201ENST00000478876 753 ntBASIC-0.08□□□□□ -2.42
APOBP04114 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.08□□□□□ -2.42
APOBP04114 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.08□□□□□ -2.42
APOBP04114 SNORA4.4-201ENST00000515921 135 ntBASIC-0.08□□□□□ -2.42
APOBP04114 RNA5SP255-201ENST00000516370 107 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC091304.9-201ENST00000612091 226 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC027335.2-201ENST00000624030 375 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC116347.2-201ENST00000514912 523 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AL158211.1-201ENST00000566763 763 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AL078604.3-201ENST00000615580 211 ntBASIC-0.08□□□□□ -2.42
APOBP04114 RNA5SP501-201ENST00000410990 112 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC119618.1-201ENST00000434191 222 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC084024.2-201ENST00000503480 791 ntBASIC-0.08□□□□□ -2.42
APOBP04114 HMGB1P29-201ENST00000505659 499 ntBASIC-0.08□□□□□ -2.42
APOBP04114 RNU4-54P-201ENST00000516428 129 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.08□□□□□ -2.42
APOBP04114 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC138393.1-203ENST00000327086 343 ntBASIC-0.08□□□□□ -2.42
APOBP04114 SNORA25.3-201ENST00000363205 127 ntBASIC-0.08□□□□□ -2.42
APOBP04114 RNU6-793P-201ENST00000384233 104 ntBASIC-0.08□□□□□ -2.42
APOBP04114 MIR635-201ENST00000384830 98 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AL109913.1-201ENST00000421173 514 ntBASIC-0.08□□□□□ -2.42
APOBP04114 HSPE1P9-201ENST00000440046 311 ntBASIC-0.08□□□□□ -2.42
APOBP04114 HMGN1P13-201ENST00000505795 138 ntBASIC-0.08□□□□□ -2.42
APOBP04114 AC008443.7-201ENST00000622195 246 ntBASIC-0.08□□□□□ -2.42
APOBP04114 Z75746.1-201ENST00000440243 2080 ntBASIC-0.08□□□□□ -2.42
APOBP04114 SNORD44.1-201ENST00000363202 61 ntBASIC-0.09□□□□□ -2.42
APOBP04114 SNORA16.2-201ENST00000390991 127 ntBASIC-0.09□□□□□ -2.42
APOBP04114 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.09□□□□□ -2.42
APOBP04114 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.09□□□□□ -2.42
APOBP04114 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOBP04114 AC090888.1-201ENST00000561335 1141 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AC022432.1-201ENST00000595739 310 ntBASIC-0.09□□□□□ -2.42
APOBP04114 RNU4-23P-201ENST00000362839 140 ntBASIC-0.09□□□□□ -2.42
APOBP04114 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.09□□□□□ -2.42
APOBP04114 TAF9BP2-201ENST00000400856 499 ntBASIC-0.09□□□□□ -2.42
APOBP04114 SNX2P2-201ENST00000424553 323 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOBP04114 MTATP6P23-201ENST00000440153 476 ntBASIC-0.09□□□□□ -2.42
APOBP04114 RNA5SP503-201ENST00000517047 117 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOBP04114 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOBP04114 AL009028.1-201ENST00000604895 802 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AC068057.2-201ENST00000624047 895 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOBP04114 MRPS36P2-201ENST00000512569 299 ntBASIC-0.09□□□□□ -2.42
APOBP04114 RNU6-943P-201ENST00000516960 98 ntBASIC-0.09□□□□□ -2.42
APOBP04114 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.09□□□□□ -2.42
APOBP04114 RNU6-414P-201ENST00000363705 104 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AC002350.1-201ENST00000490759 375 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AC105185.1-201ENST00000518705 535 ntBASIC-0.09□□□□□ -2.42
APOBP04114 RNY1P9-201ENST00000532431 109 ntBASIC-0.09□□□□□ -2.42
APOBP04114 AL713998.2-201ENST00000604538 1198 ntBASIC-0.09□□□□□ -2.42
APOBP04114 RNU4-32P-201ENST00000363404 141 ntBASIC-0.1□□□□□ -2.43
APOBP04114 RNU6-163P-201ENST00000384396 106 ntBASIC-0.1□□□□□ -2.43
APOBP04114 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
APOBP04114 RNU11-3P-201ENST00000391111 133 ntBASIC-0.1□□□□□ -2.43
APOBP04114 AC245047.7-201ENST00000440265 293 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms