Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.6□□□□□ -1.99
VTNP04004 MTAPP1-201ENST00000489154 819 ntBASIC2.6□□□□□ -1.99
VTNP04004 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.6□□□□□ -1.99
VTNP04004 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.6□□□□□ -1.99
VTNP04004 AC009901.1-201ENST00000506703 541 ntBASIC2.6□□□□□ -1.99
VTNP04004 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VTNP04004 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.6□□□□□ -1.99
VTNP04004 RNU6-1038P-201ENST00000516516 104 ntBASIC2.6□□□□□ -1.99
VTNP04004 RN7SKP282-201ENST00000516824 299 ntBASIC2.6□□□□□ -1.99
VTNP04004 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.6□□□□□ -1.99
VTNP04004 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.6□□□□□ -1.99
VTNP04004 MTND4P7-201ENST00000523876 130 ntBASIC2.6□□□□□ -1.99
VTNP04004 AC084851.1-201ENST00000529105 249 ntBASIC2.6□□□□□ -1.99
VTNP04004 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.6□□□□□ -1.99
VTNP04004 MIR5583-1-201ENST00000580941 59 ntBASIC2.6□□□□□ -1.99
VTNP04004 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.6□□□□□ -1.99
VTNP04004 AC020895.1-201ENST00000595362 272 ntBASIC2.6□□□□□ -1.99
VTNP04004 BNIP3P30-201ENST00000601184 574 ntBASIC2.6□□□□□ -1.99
VTNP04004 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VTNP04004 AL359198.2-201ENST00000611836 194 ntBASIC2.6□□□□□ -1.99
VTNP04004 DUSP12P1-201ENST00000612874 516 ntBASIC2.6□□□□□ -1.99
VTNP04004 AP001486.3-201ENST00000615334 372 ntBASIC2.6□□□□□ -1.99
VTNP04004 U6.42-201ENST00000618440 107 ntBASIC2.6□□□□□ -1.99
VTNP04004 FER-210ENST00000628534 558 ntTSL 5 BASIC2.6□□□□□ -1.99
VTNP04004 AC016717.2-201ENST00000609089 5141 ntBASIC2.6□□□□□ -1.99
VTNP04004 ZNF519P1-201ENST00000449011 1626 ntBASIC2.6□□□□□ -1.99
VTNP04004 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
VTNP04004 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VTNP04004 Y_RNA.89-201ENST00000363031 102 ntBASIC2.59□□□□□ -1.99
VTNP04004 MIR578-201ENST00000384828 96 ntBASIC2.59□□□□□ -1.99
VTNP04004 SNORD70.1-201ENST00000391007 85 ntBASIC2.59□□□□□ -1.99
VTNP04004 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.59□□□□□ -1.99
VTNP04004 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.59□□□□□ -1.99
VTNP04004 RNA5SP425-201ENST00000410336 112 ntBASIC2.59□□□□□ -1.99
VTNP04004 RN7SKP223-201ENST00000410582 62 ntBASIC2.59□□□□□ -1.99
VTNP04004 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.59□□□□□ -1.99
VTNP04004 SKA2P1-201ENST00000425592 390 ntBASIC2.59□□□□□ -1.99
VTNP04004 AL121601.2-201ENST00000438019 707 ntBASIC2.59□□□□□ -1.99
VTNP04004 RPL21P2-201ENST00000440049 481 ntBASIC2.59□□□□□ -1.99
VTNP04004 NFU1P2-201ENST00000448700 469 ntBASIC2.59□□□□□ -1.99
VTNP04004 RPS29P21-201ENST00000496272 170 ntBASIC2.59□□□□□ -1.99
VTNP04004 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.59□□□□□ -1.99
VTNP04004 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.59□□□□□ -1.99
VTNP04004 RNU6-572P-201ENST00000516724 80 ntBASIC2.59□□□□□ -1.99
VTNP04004 SUB1P1-201ENST00000524415 382 ntBASIC2.59□□□□□ -1.99
VTNP04004 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.59□□□□□ -1.99
VTNP04004 MIR5692A1-201ENST00000580523 69 ntBASIC2.59□□□□□ -1.99
VTNP04004 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.59□□□□□ -1.99
VTNP04004 uc_338.34-201ENST00000617467 174 ntBASIC2.59□□□□□ -1.99
VTNP04004 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.59□□□□□ -1.99
VTNP04004 U2.21-201ENST00000637295 81 ntBASIC2.59□□□□□ -1.99
VTNP04004 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.59□□□□□ -1.99
VTNP04004 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.59□□□□□ -2
VTNP04004 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.59□□□□□ -2
VTNP04004 RNU6-371P-201ENST00000364283 108 ntBASIC2.58□□□□□ -2
VTNP04004 Y_RNA.248-201ENST00000364501 109 ntBASIC2.58□□□□□ -2
VTNP04004 RNU6-395P-201ENST00000365662 106 ntBASIC2.58□□□□□ -2
VTNP04004 RNU6-393P-201ENST00000384475 107 ntBASIC2.58□□□□□ -2
VTNP04004 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.58□□□□□ -2
VTNP04004 MIR1277-201ENST00000408536 78 ntBASIC2.58□□□□□ -2
VTNP04004 RNU6-908P-201ENST00000410160 94 ntBASIC2.58□□□□□ -2
VTNP04004 RNU6-193P-201ENST00000410977 107 ntBASIC2.58□□□□□ -2
VTNP04004 OR9R1P-201ENST00000412200 877 ntBASIC2.58□□□□□ -2
VTNP04004 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.58□□□□□ -2
VTNP04004 MTND1P23-201ENST00000416931 372 ntBASIC2.58□□□□□ -2
VTNP04004 AL353729.1-201ENST00000425044 720 ntBASIC2.58□□□□□ -2
VTNP04004 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.58□□□□□ -2
VTNP04004 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.58□□□□□ -2
VTNP04004 AL121890.1-201ENST00000435457 205 ntBASIC2.58□□□□□ -2
VTNP04004 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.58□□□□□ -2
VTNP04004 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
VTNP04004 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
VTNP04004 AC022493.1-201ENST00000492984 337 ntBASIC2.58□□□□□ -2
VTNP04004 FAM92A1P2-202ENST00000504766 877 ntBASIC2.58□□□□□ -2
VTNP04004 YWHAEP4-201ENST00000505390 198 ntBASIC2.58□□□□□ -2
VTNP04004 MTCO3P9-201ENST00000506989 781 ntBASIC2.58□□□□□ -2
VTNP04004 SNORA31.19-201ENST00000517079 126 ntBASIC2.58□□□□□ -2
VTNP04004 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.58□□□□□ -2
VTNP04004 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.58□□□□□ -2
VTNP04004 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.58□□□□□ -2
VTNP04004 AL137161.1-201ENST00000532231 390 ntBASIC2.58□□□□□ -2
VTNP04004 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.58□□□□□ -2
VTNP04004 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.58□□□□□ -2
VTNP04004 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.58□□□□□ -2
VTNP04004 AC092325.1-201ENST00000566449 554 ntBASIC2.58□□□□□ -2
VTNP04004 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.58□□□□□ -2
VTNP04004 AC010525.2-201ENST00000590920 195 ntBASIC2.58□□□□□ -2
VTNP04004 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.58□□□□□ -2
VTNP04004 DISC2.1-201ENST00000612827 205 ntBASIC2.58□□□□□ -2
VTNP04004 AC090617.7-201ENST00000623952 126 ntBASIC2.58□□□□□ -2
VTNP04004 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
VTNP04004 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.58□□□□□ -2
VTNP04004 MTND5P6-201ENST00000422338 1798 ntBASIC2.58□□□□□ -2
VTNP04004 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.58□□□□□ -2
VTNP04004 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.57□□□□□ -2
VTNP04004 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VTNP04004 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VTNP04004 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.57□□□□□ -2
VTNP04004 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
VTNP04004 RNU6-534P-201ENST00000364877 106 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms