Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-833P-201ENST00000363486 107 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 RNU6-444P-201ENST00000383988 108 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 RNU6-45P-201ENST00000384471 107 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 MIR30A-201ENST00000385092 71 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 AC069282.1-201ENST00000411911 526 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.22□□□□□ -2.37
SPTA1P02549 AL449283.1-202ENST00000418249 604 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 USP9YP26-201ENST00000421008 661 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 USP9YP18-201ENST00000425912 695 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 USP9YP17-201ENST00000444617 696 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.22□□□□□ -2.37
SPTA1P02549 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.22□□□□□ -2.37
SPTA1P02549 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.22□□□□□ -2.37
SPTA1P02549 AC010409.1-201ENST00000487382 476 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 AC025459.1-201ENST00000504072 156 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.22□□□□□ -2.37
SPTA1P02549 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTA1P02549 EIF1P4-201ENST00000572664 335 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 BNIP3P23-201ENST00000599655 511 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 RNU6-91P-201ENST00000607774 107 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 AL365434.2-201ENST00000607979 234 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 MIR514A1-201ENST00000385133 98 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 MIR1283-2-201ENST00000408621 87 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 RNU2-64P-201ENST00000411315 191 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 DDX3P2-201ENST00000446138 111 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 AC099513.1-201ENST00000490423 301 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTA1P02549 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTA1P02549 AC026271.5-201ENST00000577873 130 ntBASIC0.22□□□□□ -2.37
SPTA1P02549 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.22□□□□□ -2.37
SPTA1P02549 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.22□□□□□ -2.37
SPTA1P02549 LINC02555-201ENST00000563933 1951 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 U3.8-201ENST00000363675 217 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 MIR214-201ENST00000385214 110 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SPTA1P02549 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.21□□□□□ -2.38
SPTA1P02549 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 RNA5SP57-201ENST00000459463 123 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 RNA5SP404-201ENST00000517118 132 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AC067904.2-201ENST00000517322 1283 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 DEFB108D-201ENST00000527787 222 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AC004217.3-201ENST00000551552 878 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 MIR4661-201ENST00000582720 75 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AC027335.2-201ENST00000624030 375 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
SPTA1P02549 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SPTA1P02549 RNU6-217P-201ENST00000384164 104 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 MIR218-1-201ENST00000384999 110 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 AL160275.3-201ENST00000423876 471 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.21□□□□□ -2.38
SPTA1P02549 MTND5P8-201ENST00000449817 1083 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 AP1S2P1-201ENST00000457344 379 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 RNU6-1004P-201ENST00000516584 111 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTA1P02549 AL158211.1-201ENST00000566763 763 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 FTX_3.1-201ENST00000610451 147 ntBASIC0.21□□□□□ -2.38
SPTA1P02549 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.21□□□□□ -2.38
SPTA1P02549 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.21□□□□□ -2.38
SPTA1P02549 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SPTA1P02549 RNU6-386P-201ENST00000362650 107 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 SNORD33-201ENST00000362761 85 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.2□□□□□ -2.38
SPTA1P02549 MIR605-201ENST00000385078 83 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SPTA1P02549 CCNG1P1-201ENST00000406783 885 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 RNU6-272P-201ENST00000411028 104 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 AC007742.1-201ENST00000425789 329 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.2□□□□□ -2.38
SPTA1P02549 NANOGP2-201ENST00000435391 727 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.2□□□□□ -2.38
SPTA1P02549 ELOCP26-201ENST00000436067 329 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 RPEP5-201ENST00000441137 268 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 NDUFB4P10-201ENST00000452541 359 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 AP003392.2-201ENST00000527269 208 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.2□□□□□ -2.38
SPTA1P02549 AC021171.1-201ENST00000603137 706 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 AP000403.1-201ENST00000603349 851 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 U2.21-201ENST00000637295 81 ntBASIC0.2□□□□□ -2.38
SPTA1P02549 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
SPTA1P02549 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.19□□□□□ -2.38
SPTA1P02549 MIR302D-201ENST00000362275 68 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 HMGN2P39-201ENST00000398005 273 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 RNU2-15P-201ENST00000410692 191 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 RNA5SP501-201ENST00000410990 112 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 PIGFP2-201ENST00000421400 651 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.19□□□□□ -2.38
SPTA1P02549 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.19□□□□□ -2.38
SPTA1P02549 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTA1P02549 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTA1P02549 AC113420.1-201ENST00000507903 571 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 RNA5SP137-201ENST00000516833 135 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AC136628.3-201ENST00000521868 290 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 C1DP5-201ENST00000525775 383 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms