Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.68□□□□□ -1.98
COL2A1P02458 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.68□□□□□ -1.98
COL2A1P02458 AC020550.1-201ENST00000447385 163 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RN7SKP210-201ENST00000459176 261 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 AC091179.1-201ENST00000461606 579 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RPL38P4-201ENST00000502376 214 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 AC093767.1-201ENST00000504523 156 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 PTP4A1P4-201ENST00000512479 322 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RNU6-1053P-201ENST00000515930 101 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RNA5SP309-201ENST00000516670 106 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RNU6-410P-201ENST00000517006 107 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.68□□□□□ -1.98
COL2A1P02458 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.68□□□□□ -1.98
COL2A1P02458 BNIP3P6-201ENST00000549284 499 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.68□□□□□ -1.98
COL2A1P02458 AC006270.2-201ENST00000578523 652 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL2A1P02458 AC073539.2-201ENST00000597113 165 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 AC009570.1-201ENST00000609599 745 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RNU6-156P-201ENST00000621869 107 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.68□□□□□ -1.98
COL2A1P02458 MTND4P14-201ENST00000435799 1354 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
COL2A1P02458 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL2A1P02458 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL2A1P02458 AC091152.2-201ENST00000591628 2569 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.67□□□□□ -1.98
COL2A1P02458 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
COL2A1P02458 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.67□□□□□ -1.98
COL2A1P02458 RNU6-97P-201ENST00000363387 104 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 RNU6-641P-201ENST00000384006 107 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 Y_RNA.422-201ENST00000384054 114 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 RNU6-1226P-201ENST00000384317 107 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 RNU6-1297P-201ENST00000384415 104 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL2A1P02458 RNU6-370P-201ENST00000411008 104 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 AL133384.1-201ENST00000412744 351 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 ATG3P1-201ENST00000419507 911 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.67□□□□□ -1.98
COL2A1P02458 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.67□□□□□ -1.98
COL2A1P02458 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.67□□□□□ -1.98
COL2A1P02458 AC092427.1-202ENST00000430569 476 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 RPS15AP28-201ENST00000435088 386 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 AC104073.1-201ENST00000451988 151 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 MIR2053-201ENST00000459295 91 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 RPL7P43-201ENST00000478876 753 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 TBCAP3-201ENST00000512475 312 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.67□□□□□ -1.98
COL2A1P02458 RNA5SP200-201ENST00000516360 103 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.67□□□□□ -1.98
COL2A1P02458 AP001804.3-201ENST00000525146 880 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 COPS8P3-201ENST00000526024 482 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 AP000763.2-201ENST00000540641 163 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.67□□□□□ -1.98
COL2A1P02458 PSMA6P4-201ENST00000603247 718 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 AC009318.4-201ENST00000620496 486 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 AC091925.1-201ENST00000623204 462 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 CYP3A51P-201ENST00000633513 256 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.67□□□□□ -1.98
COL2A1P02458 AC011460.1-201ENST00000636268 1834 ntBASIC2.67□□□□□ -1.98
COL2A1P02458 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.67□□□□□ -1.98
COL2A1P02458 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL2A1P02458 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL2A1P02458 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
COL2A1P02458 RNU6-188P-201ENST00000364207 107 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 RNU4-48P-201ENST00000365559 182 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 RNU6-639P-201ENST00000384074 107 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 RNU6-1029P-201ENST00000384109 107 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 RNU6-196P-201ENST00000384315 107 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 RNU6-328P-201ENST00000390887 106 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 RNY4P36-201ENST00000391116 96 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.66□□□□□ -1.98
COL2A1P02458 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.66□□□□□ -1.98
COL2A1P02458 AL138785.1-201ENST00000425821 331 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.66□□□□□ -1.98
COL2A1P02458 RAC1P7-201ENST00000445367 377 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL2A1P02458 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.66□□□□□ -1.98
COL2A1P02458 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.66□□□□□ -1.98
COL2A1P02458 MTCO3P10-201ENST00000455912 772 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 Y_RNA.639-201ENST00000458981 102 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 GMFBP1-201ENST00000467831 427 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC087385.1-201ENST00000475062 312 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.66□□□□□ -1.98
COL2A1P02458 HMGB3P15-201ENST00000507326 574 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 FAM206BP-201ENST00000510179 541 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 NDUFB4P9-201ENST00000511646 388 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC109635.4-202ENST00000531666 412 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.66□□□□□ -1.98
COL2A1P02458 AC008269.2-201ENST00000561915 1105 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.66□□□□□ -1.98
COL2A1P02458 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.66□□□□□ -1.98
COL2A1P02458 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.66□□□□□ -1.98
COL2A1P02458 AC025588.3-201ENST00000604182 274 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.66□□□□□ -1.98
COL2A1P02458 AC004908.2-201ENST00000609090 574 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC103710.2-201ENST00000609912 942 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC245517.5-201ENST00000611529 162 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC009831.4-201ENST00000620744 325 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 uc_338.22-201ENST00000622722 187 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms