Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.81□□□□□ -2.12
SNX4O95219 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX4O95219 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.81□□□□□ -2.12
SNX4O95219 AC112206.3-201ENST00000514578 389 ntBASIC1.81□□□□□ -2.12
SNX4O95219 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
SNX4O95219 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.81□□□□□ -2.12
SNX4O95219 AC022616.6-201ENST00000520479 119 ntBASIC1.81□□□□□ -2.12
SNX4O95219 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX4O95219 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.81□□□□□ -2.12
SNX4O95219 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX4O95219 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX4O95219 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.81□□□□□ -2.12
SNX4O95219 U2.15-201ENST00000611544 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.16-201ENST00000613119 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.12-201ENST00000613778 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.20-201ENST00000613956 192 ntBASIC1.81□□□□□ -2.12
SNX4O95219 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.81□□□□□ -2.12
SNX4O95219 U2.9-201ENST00000615427 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.11-201ENST00000616345 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.2-201ENST00000616535 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.3-201ENST00000617785 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.19-201ENST00000618602 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 RNU2-1-201ENST00000618664 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.6-201ENST00000619225 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.5-201ENST00000619465 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 U2.10-201ENST00000620268 191 ntBASIC1.81□□□□□ -2.12
SNX4O95219 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.81□□□□□ -2.12
SNX4O95219 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.81□□□□□ -2.12
SNX4O95219 Y_RNA.18-201ENST00000362461 102 ntBASIC1.8□□□□□ -2.12
SNX4O95219 RNU6-1164P-201ENST00000364428 107 ntBASIC1.8□□□□□ -2.12
SNX4O95219 MIR597-201ENST00000384968 97 ntBASIC1.8□□□□□ -2.12
SNX4O95219 AC074117.2-201ENST00000417130 397 ntBASIC1.8□□□□□ -2.12
SNX4O95219 RPS15AP12-201ENST00000419498 388 ntBASIC1.8□□□□□ -2.12
SNX4O95219 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX4O95219 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX4O95219 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.8□□□□□ -2.12
SNX4O95219 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX4O95219 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX4O95219 AC116347.2-201ENST00000514912 523 ntBASIC1.8□□□□□ -2.12
SNX4O95219 ADI1P3-201ENST00000549509 470 ntBASIC1.8□□□□□ -2.12
SNX4O95219 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
SNX4O95219 MIR548AC-201ENST00000585049 88 ntBASIC1.8□□□□□ -2.12
SNX4O95219 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX4O95219 WISP1-OT1-201ENST00000602893 642 ntBASIC1.8□□□□□ -2.12
SNX4O95219 AC013244.3-201ENST00000605614 388 ntBASIC1.8□□□□□ -2.12
SNX4O95219 AP002360.4-201ENST00000606980 481 ntBASIC1.8□□□□□ -2.12
SNX4O95219 AP000720.1-201ENST00000625091 483 ntBASIC1.8□□□□□ -2.12
SNX4O95219 AL445984.1-201ENST00000637834 659 ntBASIC1.8□□□□□ -2.12
SNX4O95219 AC006927.4-201ENST00000639187 543 ntBASIC1.8□□□□□ -2.12
SNX4O95219 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNX4O95219 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
SNX4O95219 Y_RNA.99-201ENST00000363138 105 ntBASIC1.79□□□□□ -2.12
SNX4O95219 RNU6-906P-201ENST00000384700 70 ntBASIC1.79□□□□□ -2.12
SNX4O95219 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
SNX4O95219 OR9R1P-201ENST00000412200 877 ntBASIC1.79□□□□□ -2.12
SNX4O95219 AC137499.1-201ENST00000427602 88 ntBASIC1.79□□□□□ -2.12
SNX4O95219 CBX3P6-201ENST00000430257 527 ntBASIC1.79□□□□□ -2.12
SNX4O95219 RPL37P21-201ENST00000435890 276 ntBASIC1.79□□□□□ -2.12
SNX4O95219 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.79□□□□□ -2.12
SNX4O95219 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.79□□□□□ -2.12
SNX4O95219 FAM206BP-201ENST00000510179 541 ntBASIC1.79□□□□□ -2.12
SNX4O95219 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.79□□□□□ -2.12
SNX4O95219 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.79□□□□□ -2.12
SNX4O95219 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
SNX4O95219 AC105148.1-201ENST00000604961 409 ntBASIC1.79□□□□□ -2.12
SNX4O95219 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.79□□□□□ -2.12
SNX4O95219 AC091834.1-201ENST00000614543 472 ntBASIC1.79□□□□□ -2.12
SNX4O95219 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.79□□□□□ -2.12
SNX4O95219 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
SNX4O95219 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SNX4O95219 MTND4P9-201ENST00000507819 1346 ntBASIC1.78□□□□□ -2.12
SNX4O95219 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SNX4O95219 CBX3P1-201ENST00000325243 554 ntBASIC1.78□□□□□ -2.12
SNX4O95219 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.78□□□□□ -2.12
SNX4O95219 Y_RNA.40-201ENST00000362645 93 ntBASIC1.78□□□□□ -2.12
SNX4O95219 SNORD3E-201ENST00000362899 217 ntBASIC1.78□□□□□ -2.12
SNX4O95219 RNU6-944P-201ENST00000364023 107 ntBASIC1.78□□□□□ -2.12
SNX4O95219 MIR504-201ENST00000385065 83 ntBASIC1.78□□□□□ -2.12
SNX4O95219 RPL22P18-201ENST00000417197 377 ntBASIC1.78□□□□□ -2.12
SNX4O95219 RPS27AP14-201ENST00000422868 454 ntBASIC1.78□□□□□ -2.12
SNX4O95219 TOMM20P4-201ENST00000427861 435 ntBASIC1.78□□□□□ -2.12
SNX4O95219 FDX1P2-201ENST00000450769 375 ntBASIC1.78□□□□□ -2.12
SNX4O95219 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX4O95219 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX4O95219 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SNX4O95219 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SNX4O95219 MIR3118-1-201ENST00000581787 76 ntBASIC1.78□□□□□ -2.12
SNX4O95219 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX4O95219 YWHAEP7-203ENST00000622054 312 ntBASIC1.78□□□□□ -2.12
SNX4O95219 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.78□□□□□ -2.12
SNX4O95219 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX4O95219 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.78□□□□□ -2.12
SNX4O95219 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
SNX4O95219 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.77□□□□□ -2.13
SNX4O95219 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SNX4O95219 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SNX4O95219 ZNF680P1-201ENST00000436625 1469 ntBASIC1.77□□□□□ -2.13
SNX4O95219 MIR126-201ENST00000362291 85 ntBASIC1.77□□□□□ -2.13
SNX4O95219 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SNX4O95219 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms