Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40AO75400 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF40AO75400 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40AO75400 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF40AO75400 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF40AO75400 Y_RNA.556-201ENST00000384677 113 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 RNU6-713P-201ENST00000384761 107 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PRPF40AO75400 SNORA57.1-201ENST00000391227 145 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 Y_RNA.592-201ENST00000410274 109 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF40AO75400 TBCAP1-201ENST00000436520 327 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF40AO75400 OSTCP8-201ENST00000445117 448 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AL590664.1-201ENST00000448065 339 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AL513124.1-201ENST00000450410 614 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AC026402.1-201ENST00000513642 170 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 RNU6-911P-201ENST00000516523 104 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 Y_RNA.706-201ENST00000516933 99 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF40AO75400 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF40AO75400 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AC091167.4-201ENST00000605079 184 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 MIR6867-201ENST00000610636 67 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF40AO75400 AC233981.2-201ENST00000611524 1614 ntBASIC4.45□□□□□ -1.7
PRPF40AO75400 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF40AO75400 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF40AO75400 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PRPF40AO75400 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF40AO75400 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF40AO75400 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF40AO75400 AL133383.2-201ENST00000622958 2336 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 SNORD56.1-201ENST00000362913 68 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 RNA5SP130-201ENST00000364431 114 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF40AO75400 Y_RNA.405-201ENST00000383979 100 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 Y_RNA.451-201ENST00000384200 100 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 Y_RNA.524-201ENST00000384564 100 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 Y_RNA.561-201ENST00000384694 100 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 SNORA12.2-201ENST00000391040 156 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 MIR190B-201ENST00000401119 79 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 RNU6-628P-201ENST00000410675 107 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF40AO75400 AL356095.1-201ENST00000417217 199 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 AC114482.1-201ENST00000418010 247 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 AC002075.2-201ENST00000425207 252 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 RPL23AP82-202ENST00000427528 469 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF40AO75400 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF40AO75400 AC034236.1-201ENST00000469891 373 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 MRPL42P6-201ENST00000486397 371 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF40AO75400 RNA5SP179-201ENST00000517284 121 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF40AO75400 AL391261.3-201ENST00000557194 520 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF40AO75400 AC104581.2-201ENST00000572227 430 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 AL390123.1-201ENST00000603216 237 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40AO75400 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PRPF40AO75400 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40AO75400 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40AO75400 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40AO75400 AP001486.2-201ENST00000561652 5113 ntBASIC4.44□□□□□ -1.7
PRPF40AO75400 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40AO75400 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PRPF40AO75400 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40AO75400 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
PRPF40AO75400 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PRPF40AO75400 MIR372-201ENST00000362225 67 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 RNU6-968P-201ENST00000384076 107 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 Y_RNA.551-201ENST00000384661 102 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 FTH1P15-201ENST00000406984 280 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 MIR1183-201ENST00000408856 89 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 RPL21P2-201ENST00000440049 481 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 RNU7-87P-201ENST00000459343 62 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 RNA5SP208-201ENST00000516156 78 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 RN7SKP209-201ENST00000516888 304 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF40AO75400 AC060766.3-201ENST00000591442 263 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 RPL23AP78-201ENST00000599928 470 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 AC019159.1-201ENST00000605094 187 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40AO75400 AC110491.1-201ENST00000562191 2010 ntBASIC4.43□□□□□ -1.7
PRPF40AO75400 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF40AO75400 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF40AO75400 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.42□□□□□ -1.7
PRPF40AO75400 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PRPF40AO75400 RNU4-9P-201ENST00000364951 139 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 RNA5SP283-201ENST00000365604 119 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 EIF1AXP1-201ENST00000419267 435 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 AC243964.1-201ENST00000441814 261 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 AC073910.1-201ENST00000445047 438 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 RPS29P31-201ENST00000446147 164 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms