Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC022447.4-201ENST00000504053 364 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 MRPS35P2-201ENST00000508242 191 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 RNU6-1256P-201ENST00000516539 103 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 RNU6-1073P-201ENST00000517182 106 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 RNU6-794P-201ENST00000517261 64 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 AC022616.4-201ENST00000522985 181 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 AC011602.1-201ENST00000546484 331 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.24□□□□□ -1.73
VAMP4O75379 AL162713.1-201ENST00000604480 262 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 AC018889.1-201ENST00000605372 397 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 AL121917.1-203ENST00000605534 577 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 SNORD58B-201ENST00000607313 66 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VAMP4O75379 AC091812.1-201ENST00000432235 1948 ntBASIC4.24□□□□□ -1.73
VAMP4O75379 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VAMP4O75379 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.24□□□□□ -1.73
VAMP4O75379 CDC27P3-201ENST00000635418 1910 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 Y_RNA.380-201ENST00000365663 111 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 Y_RNA.574-201ENST00000384766 95 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 RNU6-823P-201ENST00000391042 103 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AL138885.1-201ENST00000405921 675 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.23□□□□□ -1.73
VAMP4O75379 RNU7-170P-201ENST00000459303 61 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AC010401.1-201ENST00000463867 348 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.23□□□□□ -1.73
VAMP4O75379 MIR3690-201ENST00000580266 75 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.23□□□□□ -1.73
VAMP4O75379 MIR4273-201ENST00000582824 84 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AC016727.2-201ENST00000603988 621 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AC123912.5-201ENST00000605470 343 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 RMST_8.1-201ENST00000610287 165 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 uc_338.1-201ENST00000612113 180 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 MIR7112-201ENST00000616126 65 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AC084757.4-201ENST00000616350 526 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 AL138825.1-201ENST00000618587 192 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 XIST_intron.1-201ENST00000619444 68 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.23□□□□□ -1.73
VAMP4O75379 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.23□□□□□ -1.73
VAMP4O75379 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.23□□□□□ -1.73
VAMP4O75379 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.23□□□□□ -1.73
VAMP4O75379 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.23□□□□□ -1.73
VAMP4O75379 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAMP4O75379 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAMP4O75379 AL359693.1-201ENST00000614959 2407 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 RNA5SP72-201ENST00000364442 117 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 U8.8-201ENST00000365399 135 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 SET-203ENST00000372688 801 ntTSL 2 BASIC4.22□□□□□ -1.73
VAMP4O75379 MIR184-201ENST00000384962 84 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 AL357075.1-201ENST00000404107 726 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 RNU2-33P-201ENST00000410344 192 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VAMP4O75379 DPH3P2-201ENST00000422618 250 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 AL031274.1-201ENST00000450334 232 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.22□□□□□ -1.73
VAMP4O75379 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.22□□□□□ -1.73
VAMP4O75379 AC110794.1-201ENST00000505816 425 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 MTND4LP22-201ENST00000508209 276 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.22□□□□□ -1.73
VAMP4O75379 AP000889.1-201ENST00000530968 660 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.22□□□□□ -1.73
VAMP4O75379 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.22□□□□□ -1.73
VAMP4O75379 AC074050.1-201ENST00000563247 211 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 SRGNP1-201ENST00000603392 451 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 AL645944.1-201ENST00000603857 493 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 AL355297.3-201ENST00000604082 446 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 AF117829.1-206ENST00000621883 3802 ntBASIC4.22□□□□□ -1.73
VAMP4O75379 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VAMP4O75379 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VAMP4O75379 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VAMP4O75379 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.21□□□□□ -1.73
VAMP4O75379 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VAMP4O75379 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP4O75379 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP4O75379 Y_RNA.424-201ENST00000384063 103 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 Y_RNA.485-201ENST00000384395 102 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 RNU6-933P-201ENST00000384424 107 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 RNU6-505P-201ENST00000384427 107 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 Y_RNA.556-201ENST00000384677 113 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 RNU6-1109P-201ENST00000391187 107 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 AL513475.1-201ENST00000406602 315 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 RNU6-1156P-201ENST00000410365 100 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 Y_RNA.623-201ENST00000411128 95 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 SNORD56-201ENST00000413522 71 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 AL627311.1-201ENST00000431514 115 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 BX679664.1-201ENST00000434429 253 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.21□□□□□ -1.74
VAMP4O75379 AL353752.1-201ENST00000454946 260 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.21□□□□□ -1.74
VAMP4O75379 SNORA70.16-201ENST00000516390 95 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 SNORA40.14-201ENST00000516543 86 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 RNU6-635P-201ENST00000516651 102 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 RNA5SP290-201ENST00000517133 127 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.21□□□□□ -1.74
VAMP4O75379 SYF2P1-201ENST00000550658 413 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.21□□□□□ -1.74
VAMP4O75379 MIR2682-201ENST00000580305 110 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 MIR3668-201ENST00000582138 75 ntBASIC4.21□□□□□ -1.74
VAMP4O75379 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
VAMP4O75379 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VAMP4O75379 AC091152.2-201ENST00000591628 2569 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms