Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.16□□□□□ -1.9
CNOT3O75175 AC012493.2-201ENST00000595083 291 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 ELOCP5-201ENST00000604924 333 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 AL161423.1-201ENST00000613700 262 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 AC098657.3-201ENST00000620434 263 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
CNOT3O75175 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT3O75175 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.16□□□□□ -1.9
CNOT3O75175 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CNOT3O75175 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.9
CNOT3O75175 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.15□□□□□ -1.9
CNOT3O75175 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.9
CNOT3O75175 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CNOT3O75175 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CNOT3O75175 Y_RNA.404-201ENST00000383978 102 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 RNU6-1106P-201ENST00000390845 107 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AL356968.1-201ENST00000416622 474 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 ATG3P1-201ENST00000419507 911 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 UBE2V1P4-201ENST00000425374 344 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 RPL21P66-201ENST00000426566 466 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AL356867.1-201ENST00000429623 299 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 USP9YP30-201ENST00000430729 455 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.15□□□□□ -1.91
CNOT3O75175 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.15□□□□□ -1.91
CNOT3O75175 RNU7-187P-201ENST00000458985 68 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 HMGB1P30-201ENST00000492455 606 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC008716.1-201ENST00000511084 513 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 SCARNA15.2-201ENST00000516409 127 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.15□□□□□ -1.91
CNOT3O75175 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.15□□□□□ -1.91
CNOT3O75175 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.15□□□□□ -1.91
CNOT3O75175 AL157871.3-201ENST00000557231 293 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
CNOT3O75175 MIR3921-201ENST00000577308 85 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC006557.5-201ENST00000603126 811 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC136443.5-201ENST00000603741 370 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AL161798.1-201ENST00000604630 131 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC005000.2-201ENST00000605468 310 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.15□□□□□ -1.91
CNOT3O75175 AC083806.3-201ENST00000614016 455 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AL355810.1-201ENST00000614629 552 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC091925.1-201ENST00000623204 462 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.15□□□□□ -1.91
CNOT3O75175 AC073476.4-201ENST00000628409 72 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.91
CNOT3O75175 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CNOT3O75175 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
CNOT3O75175 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT3O75175 Y_RNA.33-201ENST00000362591 102 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 Y_RNA.112-201ENST00000363250 102 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 Y_RNA.151-201ENST00000363566 112 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 RNU6-525P-201ENST00000363685 104 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 SNORA38.1-201ENST00000364172 131 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 Y_RNA.245-201ENST00000364493 95 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 RNU6-395P-201ENST00000365662 106 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 RNU6-331P-201ENST00000384724 107 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 MIR517A-201ENST00000385001 87 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 SNORA48.2-201ENST00000390926 124 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 AL445529.1-201ENST00000398713 389 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 RNU6-1025P-201ENST00000410629 104 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT3O75175 AL160004.2-201ENST00000432935 350 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 AL035666.1-201ENST00000446195 348 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 SSXP4-201ENST00000451349 245 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 RNU6-1046P-201ENST00000516538 107 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 RNA5SP290-201ENST00000517133 127 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.14□□□□□ -1.91
CNOT3O75175 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.14□□□□□ -1.91
CNOT3O75175 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.14□□□□□ -1.91
CNOT3O75175 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT3O75175 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT3O75175 MIR5680-201ENST00000577577 84 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT3O75175 AC100830.2-201ENST00000581636 240 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 AC008121.3-201ENST00000618726 433 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT3O75175 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT3O75175 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
CNOT3O75175 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.13□□□□□ -1.91
CNOT3O75175 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT3O75175 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT3O75175 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT3O75175 RNU6-1115P-201ENST00000362490 106 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 RNA5SP374-201ENST00000362939 125 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 Y_RNA.148-201ENST00000363557 117 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 RNU6-1059P-201ENST00000363752 98 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 Y_RNA.324-201ENST00000365165 102 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 RNU6-1329P-201ENST00000365664 107 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 RNU6-790P-201ENST00000384479 105 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 MIR1290-201ENST00000408735 78 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.13□□□□□ -1.91
CNOT3O75175 MTND3P2-201ENST00000438452 342 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms