Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 RPF2P2-201ENST00000504693 896 ntBASIC0.71□□□□□ -2.3
PFDN1O60925 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.71□□□□□ -2.3
PFDN1O60925 SNORD116-28-201ENST00000516123 91 ntBASIC0.71□□□□□ -2.3
PFDN1O60925 RN7SKP256-201ENST00000517201 314 ntBASIC0.71□□□□□ -2.3
PFDN1O60925 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.71□□□□□ -2.3
PFDN1O60925 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.71□□□□□ -2.3
PFDN1O60925 AL133153.1-201ENST00000557756 303 ntBASIC0.71□□□□□ -2.3
PFDN1O60925 AC005786.1-201ENST00000588553 154 ntBASIC0.71□□□□□ -2.3
PFDN1O60925 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.71□□□□□ -2.3
PFDN1O60925 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.71□□□□□ -2.3
PFDN1O60925 MIR6078-201ENST00000611069 100 ntBASIC0.71□□□□□ -2.3
PFDN1O60925 AL157834.3-201ENST00000615543 103 ntBASIC0.71□□□□□ -2.3
PFDN1O60925 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
PFDN1O60925 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
PFDN1O60925 RNU6-14P-201ENST00000384630 106 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 AL356776.1-201ENST00000406574 447 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 AL161935.2-201ENST00000414627 60 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 RAC1P6-201ENST00000423911 575 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.7□□□□□ -2.3
PFDN1O60925 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.7□□□□□ -2.3
PFDN1O60925 SEPT14P24-201ENST00000447236 180 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 AC132479.1-201ENST00000449160 144 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 RNA5SP437-201ENST00000517249 129 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.7□□□□□ -2.3
PFDN1O60925 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.7□□□□□ -2.3
PFDN1O60925 MIR4513-201ENST00000581077 86 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 AP001981.2-201ENST00000603241 418 ntBASIC0.7□□□□□ -2.3
PFDN1O60925 CDR1-202ENST00000625883 1485 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 RNU4-51P-201ENST00000364206 140 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 RNU6-166P-201ENST00000384371 107 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 Y_RNA.597-201ENST00000410463 100 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 RPS12P24-201ENST00000412619 387 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PFDN1O60925 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.69□□□□□ -2.3
PFDN1O60925 C8orf59P1-201ENST00000429930 303 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 ZFAND6P1-201ENST00000434138 605 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 ELOCP30-201ENST00000447108 299 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AC079776.3-201ENST00000450665 370 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 RNA5SP269-201ENST00000459032 137 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AC098799.1-201ENST00000504752 800 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AC074344.1-201ENST00000512823 224 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.69□□□□□ -2.3
PFDN1O60925 AP005136.1-201ENST00000579765 429 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AC060771.1-201ENST00000582031 164 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 OR4H6P-202ENST00000603819 340 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AL022345.2-201ENST00000606307 135 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AL365434.2-201ENST00000607979 234 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AC013412.1-201ENST00000610687 192 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AL356094.1-201ENST00000624663 1212 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PFDN1O60925 OR4G3P-201ENST00000633500 913 ntBASIC0.69□□□□□ -2.3
PFDN1O60925 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.69□□□□□ -2.3
PFDN1O60925 RNU6-1210P-201ENST00000363775 107 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
PFDN1O60925 CBX3P9-201ENST00000402326 552 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.68□□□□□ -2.3
PFDN1O60925 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.68□□□□□ -2.3
PFDN1O60925 AL078601.1-201ENST00000444542 271 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 RNU6-1092P-201ENST00000516955 87 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 RNU6-548P-201ENST00000517083 115 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.68□□□□□ -2.3
PFDN1O60925 HMGB1P33-201ENST00000563485 527 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 AC136618.2-201ENST00000575091 400 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.68□□□□□ -2.3
PFDN1O60925 AC126365.2-201ENST00000580630 379 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 MIR4661-201ENST00000582720 75 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 BNIP3P22-201ENST00000593399 556 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.68□□□□□ -2.3
PFDN1O60925 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
PFDN1O60925 AC112204.3-201ENST00000623822 332 ntBASIC0.68□□□□□ -2.3
PFDN1O60925 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
PFDN1O60925 SNORD33-201ENST00000362761 85 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 RNU6-744P-201ENST00000365557 107 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 Y_RNA.408-201ENST00000383987 102 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 RNU6-1316P-201ENST00000384242 108 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 RNU6-1122P-201ENST00000384449 107 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 RNU6-843P-201ENST00000384454 104 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 SNORA40C-201ENST00000391285 128 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AC068533.2-201ENST00000411872 306 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 BX664727.1-201ENST00000416024 466 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.67□□□□□ -2.3
PFDN1O60925 AC009518.2-201ENST00000418056 731 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.67□□□□□ -2.3
PFDN1O60925 MTND4P6-201ENST00000438297 472 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AL606517.1-201ENST00000446914 387 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.67□□□□□ -2.3
PFDN1O60925 AC145146.1-201ENST00000496370 254 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AC097473.1-201ENST00000508142 408 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AC009646.1-201ENST00000510455 318 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.67□□□□□ -2.3
PFDN1O60925 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.67□□□□□ -2.3
PFDN1O60925 AC090578.1-201ENST00000604955 591 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AL021879.1-201ENST00000611756 288 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AC040896.1-201ENST00000613819 479 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
PFDN1O60925 AL589994.2-201ENST00000621124 579 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms