Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SMG1P6-201ENST00000532337 2930 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA3O60609 AC004076.2-201ENST00000620532 3323 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GFRA3O60609 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.78□□□□□ -1.64
GFRA3O60609 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 RNU6-652P-201ENST00000365488 107 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 MIR491-201ENST00000384877 84 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 MIR7-3-201ENST00000384898 110 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 MIR624-201ENST00000385217 97 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 MT-TC-201ENST00000387405 66 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GFRA3O60609 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.78□□□□□ -1.64
GFRA3O60609 RNU6ATAC-201ENST00000408749 126 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.78□□□□□ -1.64
GFRA3O60609 RPS29P17-201ENST00000430795 166 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 AL078601.1-201ENST00000444542 271 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 AC004656.1-201ENST00000568479 4951 ntBASIC4.78□□□□□ -1.64
GFRA3O60609 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
GFRA3O60609 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GFRA3O60609 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
GFRA3O60609 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GFRA3O60609 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GFRA3O60609 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
GFRA3O60609 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA3O60609 AC140134.1-201ENST00000511830 3544 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GFRA3O60609 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA3O60609 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA3O60609 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.77□□□□□ -1.65
GFRA3O60609 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GFRA3O60609 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA3O60609 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA3O60609 RNU1-72P-201ENST00000362976 153 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 RNU6-219P-201ENST00000364728 107 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GFRA3O60609 SNORA77-201ENST00000408716 125 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 AL356387.2-201ENST00000422272 243 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.77□□□□□ -1.65
GFRA3O60609 RNU7-61P-201ENST00000515897 61 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 SNORA18.4-201ENST00000516440 124 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 RNA5SP153-201ENST00000516498 76 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 AL021707.8-201ENST00000609428 183 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 U7.3-201ENST00000616123 62 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 AC027309.3-201ENST00000623419 351 ntBASIC4.77□□□□□ -1.65
GFRA3O60609 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA3O60609 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.77□□□□□ -1.65
GFRA3O60609 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
GFRA3O60609 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA3O60609 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
GFRA3O60609 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA3O60609 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA3O60609 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.77□□□□□ -1.65
GFRA3O60609 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
GFRA3O60609 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.76□□□□□ -1.65
GFRA3O60609 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 RNY3P2-201ENST00000362918 102 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 RNU6-1229P-201ENST00000364295 107 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 Y_RNA.265-201ENST00000364677 108 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 Y_RNA.366-201ENST00000365540 102 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 RNA5SP283-201ENST00000365604 119 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 Y_RNA.415-201ENST00000384012 112 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 Y_RNA.426-201ENST00000384068 113 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 SNORA70.10-201ENST00000384515 134 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 RNU6-987P-201ENST00000384759 104 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 SNORA48.4-201ENST00000391089 134 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 RNA5SP496-201ENST00000391240 109 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 AC098976.1-201ENST00000513014 541 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 RNU6-162P-201ENST00000516228 103 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 AC097639.2-201ENST00000603159 172 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 AC025754.2-201ENST00000606491 432 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA3O60609 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.76□□□□□ -1.65
GFRA3O60609 AC017071.1-201ENST00000564407 2204 ntBASIC4.76□□□□□ -1.65
GFRA3O60609 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
GFRA3O60609 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.75□□□□□ -1.65
GFRA3O60609 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
GFRA3O60609 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA3O60609 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
GFRA3O60609 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.75□□□□□ -1.65
GFRA3O60609 Y_RNA.91-201ENST00000363042 107 ntBASIC4.75□□□□□ -1.65
GFRA3O60609 Y_RNA.94-201ENST00000363068 106 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms