Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AL121594.1-201ENST00000475906 575 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.55□□□□□ -2
PLOD3O60568 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.55□□□□□ -2
PLOD3O60568 RNU6-377P-201ENST00000515965 102 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC109479.2-201ENST00000517842 174 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.55□□□□□ -2
PLOD3O60568 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.55□□□□□ -2
PLOD3O60568 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.55□□□□□ -2
PLOD3O60568 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.55□□□□□ -2
PLOD3O60568 MIR3941-201ENST00000582572 103 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC119751.7-201ENST00000600494 245 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC025449.1-201ENST00000603896 529 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC005000.2-201ENST00000605468 310 ntBASIC2.55□□□□□ -2
PLOD3O60568 Z82243.1-201ENST00000609432 473 ntBASIC2.55□□□□□ -2
PLOD3O60568 AC135507.2-201ENST00000612443 309 ntBASIC2.55□□□□□ -2
PLOD3O60568 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PLOD3O60568 AC022418.1-201ENST00000624118 445 ntBASIC2.55□□□□□ -2
PLOD3O60568 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.55□□□□□ -2
PLOD3O60568 U4.7-201ENST00000638126 106 ntBASIC2.55□□□□□ -2
PLOD3O60568 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.55□□□□□ -2
PLOD3O60568 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
PLOD3O60568 ZNF680P1-201ENST00000436625 1469 ntBASIC2.54□□□□□ -2
PLOD3O60568 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
PLOD3O60568 RNU5A-6P-201ENST00000384136 116 ntBASIC2.54□□□□□ -2
PLOD3O60568 Y_RNA.553-201ENST00000384670 102 ntBASIC2.54□□□□□ -2
PLOD3O60568 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
PLOD3O60568 BTF3P7-201ENST00000407097 488 ntBASIC2.54□□□□□ -2
PLOD3O60568 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.54□□□□□ -2
PLOD3O60568 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.54□□□□□ -2
PLOD3O60568 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.54□□□□□ -2
PLOD3O60568 AL669831.1-202ENST00000428504 417 ntBASIC2.54□□□□□ -2
PLOD3O60568 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.54□□□□□ -2
PLOD3O60568 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.54□□□□□ -2
PLOD3O60568 AC112220.1-201ENST00000434628 355 ntBASIC2.54□□□□□ -2
PLOD3O60568 MTCO2P16-201ENST00000436962 677 ntBASIC2.54□□□□□ -2
PLOD3O60568 GTF2IP13-201ENST00000438487 386 ntBASIC2.54□□□□□ -2
PLOD3O60568 AL031667.1-201ENST00000440222 725 ntBASIC2.54□□□□□ -2
PLOD3O60568 RPL39P29-201ENST00000447779 157 ntBASIC2.54□□□□□ -2
PLOD3O60568 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
PLOD3O60568 AL356010.1-201ENST00000456364 102 ntBASIC2.54□□□□□ -2
PLOD3O60568 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.54□□□□□ -2
PLOD3O60568 snoU13.14-201ENST00000459372 104 ntBASIC2.54□□□□□ -2
PLOD3O60568 RPS3AP17-201ENST00000472594 777 ntBASIC2.54□□□□□ -2
PLOD3O60568 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
PLOD3O60568 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.54□□□□□ -2
PLOD3O60568 SNORA4.4-201ENST00000515921 135 ntBASIC2.54□□□□□ -2
PLOD3O60568 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.54□□□□□ -2
PLOD3O60568 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.54□□□□□ -2
PLOD3O60568 AC026271.5-201ENST00000577873 130 ntBASIC2.54□□□□□ -2
PLOD3O60568 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PLOD3O60568 AC005609.4-201ENST00000625071 447 ntBASIC2.54□□□□□ -2
PLOD3O60568 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
PLOD3O60568 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.53□□□□□ -2
PLOD3O60568 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.53□□□□□ -2
PLOD3O60568 RNU6-37P-201ENST00000362692 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-11P-201ENST00000364234 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-7-201ENST00000364784 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-8-201ENST00000365467 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-25P-201ENST00000383873 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-1-201ENST00000383898 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-48P-201ENST00000384161 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-36P-201ENST00000384172 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-4P-201ENST00000384205 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-5P-201ENST00000384238 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-3P-201ENST00000384314 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-16P-201ENST00000384385 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-15P-201ENST00000384534 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-2-201ENST00000384627 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-29P-201ENST00000384637 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-9-201ENST00000384776 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-33P-201ENST00000384793 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
PLOD3O60568 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.53□□□□□ -2
PLOD3O60568 MTCO2P34-201ENST00000421994 607 ntBASIC2.53□□□□□ -2
PLOD3O60568 AC073464.1-201ENST00000429823 534 ntBASIC2.53□□□□□ -2
PLOD3O60568 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.53□□□□□ -2
PLOD3O60568 AC090525.1-201ENST00000479116 478 ntBASIC2.53□□□□□ -2
PLOD3O60568 RPS3AP14-201ENST00000483907 780 ntBASIC2.53□□□□□ -2
PLOD3O60568 AC093534.1-201ENST00000504977 132 ntBASIC2.53□□□□□ -2
PLOD3O60568 AC010424.1-201ENST00000506336 297 ntBASIC2.53□□□□□ -2
PLOD3O60568 AC092436.1-201ENST00000506450 503 ntBASIC2.53□□□□□ -2
PLOD3O60568 MTND2P33-201ENST00000506452 1031 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
PLOD3O60568 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.53□□□□□ -2
PLOD3O60568 MYL12BP1-201ENST00000569826 507 ntBASIC2.53□□□□□ -2
PLOD3O60568 ELOCP29-201ENST00000588193 334 ntBASIC2.53□□□□□ -2
PLOD3O60568 AC091805.2-201ENST00000603848 235 ntBASIC2.53□□□□□ -2
PLOD3O60568 AL136363.2-201ENST00000604173 851 ntBASIC2.53□□□□□ -2
PLOD3O60568 ELOCP5-201ENST00000604924 333 ntBASIC2.53□□□□□ -2
PLOD3O60568 AL160281.1-201ENST00000605307 311 ntBASIC2.53□□□□□ -2
PLOD3O60568 RNU6-6P-201ENST00000606623 107 ntBASIC2.53□□□□□ -2
PLOD3O60568 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.53□□□□□ -2
PLOD3O60568 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.53□□□□□ -2
PLOD3O60568 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PLOD3O60568 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
PLOD3O60568 Y_RNA.296-201ENST00000364930 108 ntBASIC2.52□□□□□ -2.01
PLOD3O60568 SNORD116-9-201ENST00000384000 95 ntBASIC2.52□□□□□ -2.01
PLOD3O60568 SNORA75-201ENST00000384158 137 ntBASIC2.52□□□□□ -2.01
PLOD3O60568 SNORD116-3-201ENST00000384287 95 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms