Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 PGBD4P6-201ENST00000421501 610 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHP1O15259 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHP1O15259 AC073464.1-201ENST00000429823 534 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AL139415.2-201ENST00000431968 163 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AC011816.1-201ENST00000441346 546 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHP1O15259 MTND1P18-201ENST00000448191 573 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AL356010.1-201ENST00000456364 102 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 RPS3AP17-201ENST00000472594 777 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AC018437.1-201ENST00000492214 406 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 MTCO3P9-201ENST00000506989 781 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AC108078.1-201ENST00000508073 725 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 SNORA25.11-201ENST00000515935 105 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 ELOCP31-201ENST00000540463 467 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHP1O15259 AC079598.5-201ENST00000547460 117 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP1O15259 MIR5571-201ENST00000577998 113 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
NPHP1O15259 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.16□□□□□ -1.9
NPHP1O15259 RNU5A-6P-201ENST00000384136 116 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 MTCO2P19-201ENST00000427513 598 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.16□□□□□ -1.9
NPHP1O15259 RNU7-26P-201ENST00000458980 63 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 AC112771.1-201ENST00000463581 102 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 GMFBP1-201ENST00000467831 427 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.16□□□□□ -1.9
NPHP1O15259 HMGB1P29-201ENST00000505659 499 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 RNU6-1178P-201ENST00000516674 107 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.16□□□□□ -1.9
NPHP1O15259 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.16□□□□□ -1.9
NPHP1O15259 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP1O15259 IGKV3-31-201ENST00000523109 329 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 AP005435.4-201ENST00000529514 284 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 CR383656.8-201ENST00000549046 145 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 MTCYBP33-201ENST00000575007 1130 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 MIR4648-201ENST00000580107 72 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 AC008536.2-201ENST00000607284 349 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.16□□□□□ -1.9
NPHP1O15259 HMGB1P24-202ENST00000615653 685 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
NPHP1O15259 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP1O15259 AC005609.4-201ENST00000625071 447 ntBASIC3.16□□□□□ -1.9
NPHP1O15259 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NPHP1O15259 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NPHP1O15259 AL139276.1-201ENST00000311910 1001 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC138393.1-203ENST00000327086 343 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 Y_RNA.296-201ENST00000364930 108 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHP1O15259 CYCSP33-201ENST00000414485 327 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC097463.2-201ENST00000421074 142 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 MTCO3P30-201ENST00000426425 670 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 TOMM20P4-201ENST00000427861 435 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHP1O15259 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.15□□□□□ -1.91
NPHP1O15259 AC103975.1-201ENST00000482506 483 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC234781.5-201ENST00000508429 271 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.15□□□□□ -1.91
NPHP1O15259 AC105417.1-201ENST00000514691 285 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 SMURF2P1-201ENST00000514992 481 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 RNU6-405P-201ENST00000516637 110 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC021269.2-201ENST00000532318 330 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 MTND1P15-201ENST00000579262 949 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC087683.1-201ENST00000591187 441 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 RPS15AP11-201ENST00000594193 385 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AP001596.2-201ENST00000608410 312 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC009090.3-201ENST00000616553 565 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 AC048344.4-201ENST00000619744 527 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 MIR3529-201ENST00000637713 78 ntBASIC3.15□□□□□ -1.91
NPHP1O15259 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.15□□□□□ -1.91
NPHP1O15259 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPHP1O15259 RBBP8P1-201ENST00000449447 1844 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPHP1O15259 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPHP1O15259 OR4G2P-201ENST00000328113 903 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPHP1O15259 RNU6-843P-201ENST00000384454 104 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 MIR518C-201ENST00000384822 101 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 BTF3P7-201ENST00000407097 488 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.14□□□□□ -1.91
NPHP1O15259 AC003685.2-201ENST00000422795 395 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.14□□□□□ -1.91
NPHP1O15259 AC002486.1-201ENST00000435098 391 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 AL451074.3-201ENST00000437709 472 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.14□□□□□ -1.91
NPHP1O15259 AC074344.1-201ENST00000512823 224 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 RN7SKP219-201ENST00000516825 296 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.14□□□□□ -1.91
NPHP1O15259 MIR4658-201ENST00000584344 65 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 AC008752.3-201ENST00000588113 712 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 BNIP3P30-201ENST00000601184 574 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 AL449363.1-201ENST00000617815 186 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 CR381653.2-201ENST00000624041 768 ntBASIC3.14□□□□□ -1.91
NPHP1O15259 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
NPHP1O15259 HAUS6P2-201ENST00000433254 2404 ntBASIC3.13□□□□□ -1.91
NPHP1O15259 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms