Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 uc_338.34-201ENST00000617467 174 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.91□□□□□ -1.94
ATP2A1O14983 AC110079.1-202ENST00000635213 138 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 AC008669.1-201ENST00000565823 2178 ntBASIC2.91□□□□□ -1.94
ATP2A1O14983 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
ATP2A1O14983 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.9□□□□□ -1.94
ATP2A1O14983 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATP2A1O14983 SNORD56.5-201ENST00000364281 72 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 SNORA70B-201ENST00000384210 135 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 RNU6-166P-201ENST00000384371 107 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 RNU6-393P-201ENST00000384475 107 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 RNU6-1179P-201ENST00000384667 107 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 SNORA26.7-201ENST00000391288 122 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 BTF3P7-201ENST00000407097 488 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.9□□□□□ -1.95
ATP2A1O14983 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 AL353621.1-201ENST00000418219 243 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 SNRPEP10-201ENST00000420249 274 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 RPS15AP27-201ENST00000449183 343 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 TRBV12-1-201ENST00000479785 344 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 SRIP1-201ENST00000489235 288 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 HMGB1P30-201ENST00000492455 606 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.9□□□□□ -1.95
ATP2A1O14983 AC022634.1-201ENST00000520765 532 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.9□□□□□ -1.95
ATP2A1O14983 MTND4P7-201ENST00000523876 130 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 SUB1P1-201ENST00000524415 382 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.9□□□□□ -1.95
ATP2A1O14983 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.9□□□□□ -1.95
ATP2A1O14983 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.9□□□□□ -1.95
ATP2A1O14983 AL138976.2-201ENST00000563989 694 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 AC073539.2-201ENST00000597113 165 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 DISC2.1-201ENST00000612827 205 ntBASIC2.9□□□□□ -1.95
ATP2A1O14983 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.9□□□□□ -1.95
ATP2A1O14983 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATP2A1O14983 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATP2A1O14983 Y_RNA.38-201ENST00000362617 102 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 SNORD3E-201ENST00000362899 217 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 RNU6-451P-201ENST00000362921 107 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 Y_RNA.89-201ENST00000363031 102 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 Y_RNA.453-201ENST00000384223 109 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 RNU6-434P-201ENST00000384376 107 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 MIR592-201ENST00000384959 97 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 SNORD70.1-201ENST00000391007 85 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AL359511.1-201ENST00000402970 211 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 SNORA3.2-201ENST00000408221 125 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 MIR1277-201ENST00000408536 78 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 RNU6-1068P-201ENST00000410958 103 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 Y_RNA.623-201ENST00000411128 95 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AL627311.1-201ENST00000431514 115 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.89□□□□□ -1.95
ATP2A1O14983 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.89□□□□□ -1.95
ATP2A1O14983 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 FGF7P6-202ENST00000451282 293 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AL583843.1-201ENST00000456070 346 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 RN7SL297P-201ENST00000483161 293 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 RPL38P4-201ENST00000502376 214 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AC091885.1-201ENST00000506658 268 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AC008413.1-201ENST00000511864 177 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 MTND1P35-201ENST00000526739 508 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.89□□□□□ -1.95
ATP2A1O14983 MTCO3P23-201ENST00000561363 289 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 MIR5583-1-201ENST00000580941 59 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.89□□□□□ -1.95
ATP2A1O14983 AL645944.1-201ENST00000603857 493 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 RMST_4.1-201ENST00000616886 107 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.89□□□□□ -1.95
ATP2A1O14983 AC022418.1-201ENST00000624118 445 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AL160394.1-201ENST00000624765 724 ntBASIC2.89□□□□□ -1.95
ATP2A1O14983 AC016717.2-201ENST00000609089 5141 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
ATP2A1O14983 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
ATP2A1O14983 RNA5SP289-201ENST00000362332 137 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 RNU1-105P-201ENST00000363470 161 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 RNA5SP456-201ENST00000364002 114 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 SNORD14B-201ENST00000364533 90 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 Y_RNA.256-201ENST00000364594 104 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 Y_RNA.399-201ENST00000383955 105 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 MIR514A2-201ENST00000385131 88 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 MIR514A3-201ENST00000385132 88 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 SNORA16.2-201ENST00000390991 127 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 AL356057.2-201ENST00000403318 432 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.88□□□□□ -1.95
ATP2A1O14983 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.88□□□□□ -1.95
ATP2A1O14983 AL513477.1-202ENST00000417061 214 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.88□□□□□ -1.95
ATP2A1O14983 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.88□□□□□ -1.95
ATP2A1O14983 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.88□□□□□ -1.95
ATP2A1O14983 RPS15AP5-201ENST00000436276 388 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.88□□□□□ -1.95
ATP2A1O14983 RPL21P2-201ENST00000440049 481 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 CALM1P1-201ENST00000442082 433 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.88□□□□□ -1.95
ATP2A1O14983 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.88□□□□□ -1.95
ATP2A1O14983 HMGN2P10-201ENST00000448085 265 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.88□□□□□ -1.95
ATP2A1O14983 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.88□□□□□ -1.95
ATP2A1O14983 RNU2-69P-201ENST00000516061 100 ntBASIC2.88□□□□□ -1.95
ATP2A1O14983 RNU6-826P-201ENST00000516827 104 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms