Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
E2F3O00716 MIR15A-201ENST00000607334 83 ntBASIC2.4□□□□□ -2.03
E2F3O00716 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
E2F3O00716 AC012409.4-201ENST00000612923 249 ntBASIC2.4□□□□□ -2.03
E2F3O00716 U4.3-201ENST00000621047 82 ntBASIC2.4□□□□□ -2.03
E2F3O00716 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.4□□□□□ -2.03
E2F3O00716 AC098679.4-201ENST00000624241 654 ntBASIC2.4□□□□□ -2.03
E2F3O00716 AC124864.2-201ENST00000624736 186 ntBASIC2.4□□□□□ -2.03
E2F3O00716 AL157786.1-207ENST00000627771 695 ntBASIC2.4□□□□□ -2.03
E2F3O00716 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.4□□□□□ -2.03
E2F3O00716 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
E2F3O00716 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
E2F3O00716 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
E2F3O00716 ZNF658B-202ENST00000615961 3375 ntBASIC2.39□□□□□ -2.03
E2F3O00716 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.39□□□□□ -2.03
E2F3O00716 OR56A5-201ENST00000340110 738 ntBASIC2.39□□□□□ -2.03
E2F3O00716 Y_RNA.3-201ENST00000362331 103 ntBASIC2.39□□□□□ -2.03
E2F3O00716 Y_RNA.41-201ENST00000362646 102 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RNU6-1287P-201ENST00000362914 107 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RNA5SP125-201ENST00000364843 120 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RNU4-48P-201ENST00000365559 182 ntBASIC2.39□□□□□ -2.03
E2F3O00716 SNORA4.3-201ENST00000365564 137 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RNU6-1060P-201ENST00000384664 107 ntBASIC2.39□□□□□ -2.03
E2F3O00716 CISD1P1-201ENST00000393907 327 ntBASIC2.39□□□□□ -2.03
E2F3O00716 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.39□□□□□ -2.03
E2F3O00716 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.39□□□□□ -2.03
E2F3O00716 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.39□□□□□ -2.03
E2F3O00716 FDX1P2-201ENST00000450769 375 ntBASIC2.39□□□□□ -2.03
E2F3O00716 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.39□□□□□ -2.03
E2F3O00716 RPS29P15-201ENST00000458329 171 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RNA5SP112-201ENST00000515937 99 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RNU6-237P-201ENST00000515985 71 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RNU6-720P-201ENST00000516363 108 ntBASIC2.39□□□□□ -2.03
E2F3O00716 MIR892C-201ENST00000516410 77 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RPL7P20-201ENST00000520308 745 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RANP3-201ENST00000530970 276 ntBASIC2.39□□□□□ -2.03
E2F3O00716 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.39□□□□□ -2.03
E2F3O00716 AL391646.1-201ENST00000603860 190 ntBASIC2.39□□□□□ -2.03
E2F3O00716 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.39□□□□□ -2.03
E2F3O00716 CTSLP2-204ENST00000629029 392 ntBASIC2.39□□□□□ -2.03
E2F3O00716 AC099654.12-201ENST00000639868 649 ntBASIC2.39□□□□□ -2.03
E2F3O00716 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
E2F3O00716 ZNF680P1-201ENST00000436625 1469 ntBASIC2.39□□□□□ -2.03
E2F3O00716 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
E2F3O00716 RNU6-486P-201ENST00000363116 107 ntBASIC2.38□□□□□ -2.03
E2F3O00716 Y_RNA.159-201ENST00000363674 87 ntBASIC2.38□□□□□ -2.03
E2F3O00716 SNORD115-7-201ENST00000365306 82 ntBASIC2.38□□□□□ -2.03
E2F3O00716 Y_RNA.409-201ENST00000383990 98 ntBASIC2.38□□□□□ -2.03
E2F3O00716 Y_RNA.576-201ENST00000384781 102 ntBASIC2.38□□□□□ -2.03
E2F3O00716 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
E2F3O00716 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
E2F3O00716 U6atac.2-201ENST00000408644 118 ntBASIC2.38□□□□□ -2.03
E2F3O00716 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
E2F3O00716 RNU6-387P-201ENST00000411331 105 ntBASIC2.38□□□□□ -2.03
E2F3O00716 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.38□□□□□ -2.03
E2F3O00716 OR51A5P-201ENST00000415429 942 ntBASIC2.38□□□□□ -2.03
E2F3O00716 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
E2F3O00716 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.38□□□□□ -2.03
E2F3O00716 AC007560.1-201ENST00000426912 237 ntBASIC2.38□□□□□ -2.03
E2F3O00716 MTCO2P19-201ENST00000427513 598 ntBASIC2.38□□□□□ -2.03
E2F3O00716 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.38□□□□□ -2.03
E2F3O00716 MTND1P18-201ENST00000448191 573 ntBASIC2.38□□□□□ -2.03
E2F3O00716 PSPHP1-201ENST00000450062 261 ntBASIC2.38□□□□□ -2.03
E2F3O00716 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.38□□□□□ -2.03
E2F3O00716 AP001324.2-201ENST00000461163 319 ntBASIC2.38□□□□□ -2.03
E2F3O00716 SRRM1P2-201ENST00000464531 1192 ntBASIC2.38□□□□□ -2.03
E2F3O00716 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.38□□□□□ -2.03
E2F3O00716 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.38□□□□□ -2.03
E2F3O00716 RNU6-314P-201ENST00000516574 104 ntBASIC2.38□□□□□ -2.03
E2F3O00716 RNA5SP503-201ENST00000517047 117 ntBASIC2.38□□□□□ -2.03
E2F3O00716 RNU6-1183P-201ENST00000517054 60 ntBASIC2.38□□□□□ -2.03
E2F3O00716 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.38□□□□□ -2.03
E2F3O00716 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.38□□□□□ -2.03
E2F3O00716 AC008521.1-201ENST00000587471 187 ntBASIC2.38□□□□□ -2.03
E2F3O00716 AC068790.6-201ENST00000602558 258 ntBASIC2.38□□□□□ -2.03
E2F3O00716 AC139792.3-201ENST00000623525 224 ntBASIC2.38□□□□□ -2.03
E2F3O00716 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
E2F3O00716 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
E2F3O00716 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
E2F3O00716 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
E2F3O00716 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
E2F3O00716 AL109809.4-201ENST00000603520 2185 ntBASIC2.37□□□□□ -2.03
E2F3O00716 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
E2F3O00716 AC103710.2-202ENST00000641454 2853 ntBASIC2.37□□□□□ -2.03
E2F3O00716 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
E2F3O00716 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
E2F3O00716 RNA5SP289-201ENST00000362332 137 ntBASIC2.37□□□□□ -2.03
E2F3O00716 U8.2-201ENST00000363156 134 ntBASIC2.37□□□□□ -2.03
E2F3O00716 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
E2F3O00716 RNU6-116P-201ENST00000384042 109 ntBASIC2.37□□□□□ -2.03
E2F3O00716 SNORA41-201ENST00000384675 132 ntBASIC2.37□□□□□ -2.03
E2F3O00716 MTCO3P40-201ENST00000392516 676 ntBASIC2.37□□□□□ -2.03
E2F3O00716 AL591416.1-201ENST00000404015 867 ntBASIC2.37□□□□□ -2.03
E2F3O00716 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.37□□□□□ -2.03
E2F3O00716 MTND1P34-201ENST00000438556 671 ntBASIC2.37□□□□□ -2.03
E2F3O00716 AC092001.1-201ENST00000453012 261 ntBASIC2.37□□□□□ -2.03
E2F3O00716 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.37□□□□□ -2.03
E2F3O00716 AC109927.2-201ENST00000506416 303 ntBASIC2.37□□□□□ -2.03
E2F3O00716 SNORD27.1-201ENST00000516319 72 ntBASIC2.37□□□□□ -2.03
E2F3O00716 RNU6-506P-201ENST00000516553 94 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms