Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC091912.2-201ENST00000624798 167 ntBASIC0.27□□□□□ -2.37
CACNA1AO00555 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CACNA1AO00555 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CACNA1AO00555 RNU6-884P-201ENST00000363889 107 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 SNORA32.3-201ENST00000384772 121 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 MIR218-1-201ENST00000384999 110 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC078974.1-201ENST00000411597 223 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1AO00555 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1AO00555 AC097463.2-201ENST00000421074 142 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 FAM204CP-201ENST00000424489 642 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC007742.1-201ENST00000425789 329 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC092634.2-201ENST00000428146 1010 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 ELOCP26-201ENST00000436067 329 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 MTND2P19-201ENST00000449129 1012 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1AO00555 LARP1BP2-201ENST00000486594 519 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 SNORA31.6-201ENST00000516241 130 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 CR383656.7-201ENST00000548164 174 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC012435.1-202ENST00000568772 240 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC136618.2-201ENST00000575091 400 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 MIR3126-201ENST00000577443 74 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.26□□□□□ -2.37
CACNA1AO00555 AP000238.1-201ENST00000608759 426 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC008498.1-201ENST00000613012 531 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AP003399.1-201ENST00000637534 361 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 MIR371B-201ENST00000638082 66 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 RNU6-31P-201ENST00000384388 108 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AL139098.1-201ENST00000407291 389 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 GTF2IP20-201ENST00000431663 360 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1AO00555 MRPS17P3-201ENST00000465453 385 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.26□□□□□ -2.37
CACNA1AO00555 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AP001328.1-201ENST00000528550 176 ntBASIC0.26□□□□□ -2.37
CACNA1AO00555 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1AO00555 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
CACNA1AO00555 AL359854.1-201ENST00000614203 1594 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 MTND5P31-201ENST00000419366 1374 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 SNORD115-3-201ENST00000363100 82 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 RNU6-251P-201ENST00000363235 104 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 RNU6-1249P-201ENST00000363237 111 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 RNU6-271P-201ENST00000363858 105 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 SNORA25.8-201ENST00000364831 128 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 RNU6-611P-201ENST00000384276 104 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 MIR618-201ENST00000385287 98 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 RNU6-712P-201ENST00000410558 100 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 RNU6-233P-201ENST00000410845 141 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
CACNA1AO00555 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1AO00555 BPY2DP-201ENST00000422208 265 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 UBE2V2P3-201ENST00000433562 437 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AL354941.1-201ENST00000438600 464 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC092393.1-201ENST00000439625 742 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 MTCYBP3-201ENST00000445588 1137 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1AO00555 VPS26AP1-201ENST00000483197 979 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AP003066.2-201ENST00000529375 555 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC015688.2-201ENST00000584523 262 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1AO00555 AC025588.3-201ENST00000604182 274 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC018618.2-201ENST00000604770 446 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AL137246.1-201ENST00000607072 977 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AL022345.1-201ENST00000607292 135 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CACNA1AO00555 MIR561-201ENST00000385216 97 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AL589655.1-201ENST00000405398 482 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC010385.1-201ENST00000412374 256 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1AO00555 ARPC3P5-201ENST00000448802 534 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AP000797.1-201ENST00000478870 387 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC147055.4-201ENST00000504399 745 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1AO00555 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AP006587.4-201ENST00000526053 529 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AP003122.4-201ENST00000530980 758 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.25□□□□□ -2.37
CACNA1AO00555 AC025588.2-201ENST00000604851 466 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC021851.1-201ENST00000608537 1082 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1AO00555 AC009318.4-201ENST00000620496 486 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1AO00555 AC068647.2-201ENST00000637380 353 ntBASIC0.25□□□□□ -2.37
CACNA1AO00555 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1AO00555 RNU6-529P-201ENST00000363383 104 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 SNORD82-201ENST00000365530 70 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 RNU6-441P-201ENST00000384545 106 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1AO00555 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1AO00555 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1AO00555 AC006026.2-201ENST00000457376 180 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC087477.1-201ENST00000465747 340 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC099513.1-201ENST00000490423 301 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 HMGB1P35-201ENST00000503360 598 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.24□□□□□ -2.37
CACNA1AO00555 SCARNA8-201ENST00000515924 131 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.24□□□□□ -2.37
CACNA1AO00555 AC019288.1-201ENST00000557918 224 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC009268.1-201ENST00000561352 1203 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms