Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 MTND5P1-201ENST00000445440 1375 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 MTND4P23-201ENST00000447723 1363 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 RNA5SP119-201ENST00000362715 117 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 RNU4-73P-201ENST00000363164 141 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 SNORD56.3-201ENST00000363507 71 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 RNA5SP50-201ENST00000363731 107 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 Y_RNA.384-201ENST00000383909 102 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 RNU6-843P-201ENST00000384454 104 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 MIR147B-201ENST00000390185 80 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 RNU6-1245P-201ENST00000411130 106 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 RNU6-325P-201ENST00000411132 105 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AL358075.3-201ENST00000426289 226 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC097713.2-201ENST00000430199 356 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 HMGN2P31-201ENST00000432430 273 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 OSTCP8-201ENST00000445117 448 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AL358232.1-201ENST00000448030 501 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 MTND4P17-201ENST00000470444 350 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC018437.1-201ENST00000492214 406 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC114801.2-201ENST00000503825 781 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC116337.1-201ENST00000509680 687 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 RNA5SP217-201ENST00000515959 91 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 SRGNP1-201ENST00000603392 451 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 AL591516.1-201ENST00000611326 274 ntBASIC2.91□□□□□ -1.94
NPIPB4C9JG80 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPB4C9JG80 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
NPIPB4C9JG80 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
NPIPB4C9JG80 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
NPIPB4C9JG80 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
NPIPB4C9JG80 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.9□□□□□ -1.94
NPIPB4C9JG80 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RPL9P7-201ENST00000330965 580 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 Y_RNA.61-201ENST00000362835 102 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 Y_RNA.387-201ENST00000383918 102 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 Y_RNA.482-201ENST00000384377 111 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 MIR1289-1-201ENST00000408836 144 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RPL32P35-201ENST00000415214 394 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC074117.2-201ENST00000417130 397 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC009414.1-201ENST00000427200 443 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AL513043.1-201ENST00000439124 535 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 DAP3P1-201ENST00000441522 278 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC115115.1-201ENST00000449927 248 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 PCMTD1P1-201ENST00000455560 355 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RPL9P9-202ENST00000466501 579 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 GZMAP1-201ENST00000503054 631 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC110794.1-201ENST00000505816 425 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 SMURF2P1-201ENST00000514992 481 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RNU1-143P-201ENST00000516296 146 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RNU6-1016P-201ENST00000516689 94 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AL355375.2-201ENST00000574825 175 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 MIR3922-201ENST00000585192 84 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC019159.1-201ENST00000605094 187 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC124303.1-201ENST00000605703 360 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RNU6-91P-201ENST00000607774 107 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AL133215.3-201ENST00000609801 448 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 U1.23-201ENST00000610293 146 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 RNU1-68P-201ENST00000615382 146 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 MIR6128-201ENST00000615528 109 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 UCA1.1-201ENST00000620952 75 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 U1.39-201ENST00000621562 146 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 AC138627.2-201ENST00000624202 601 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NPIPB4C9JG80 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.9□□□□□ -1.95
NPIPB4C9JG80 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPIPB4C9JG80 SNORD56.1-201ENST00000362913 68 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 Y_RNA.151-201ENST00000363566 112 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPB4C9JG80 RNU6-601P-201ENST00000384540 107 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 MIR200C-201ENST00000384980 68 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 MIR449B-201ENST00000384995 97 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 MIR517A-201ENST00000385001 87 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 MIR134-201ENST00000385258 73 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 AC245054.2-201ENST00000415639 319 ntBASIC2.89□□□□□ -1.95
NPIPB4C9JG80 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPB4C9JG80 RN7SL601P-201ENST00000471221 293 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms