Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.63□□□□□ -1.99
HMGB1P1B2RPK0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGB1P1B2RPK0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGB1P1B2RPK0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGB1P1B2RPK0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
HMGB1P1B2RPK0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGB1P1B2RPK0 AC245060.5-201ENST00000610778 3293 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 SNORD14D-201ENST00000384390 87 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 RNU6-393P-201ENST00000384475 107 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 MIR141-201ENST00000384975 95 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 SNORA40.19-201ENST00000390846 128 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 RNU4-46P-201ENST00000410818 138 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC005326.1-201ENST00000429197 123 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 RPS6P15-201ENST00000431996 751 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC097462.2-201ENST00000504623 481 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC117532.1-201ENST00000514638 323 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 RNA5SP282-201ENST00000516355 108 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 RN7SKP57-201ENST00000517248 293 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 MIR3160-1-201ENST00000577972 85 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 MIR378J-201ENST00000611988 109 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 MIR7112-201ENST00000616126 65 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AL359314.1-201ENST00000616913 261 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AL365361.1-201ENST00000566942 3481 ntBASIC2.62□□□□□ -1.99
HMGB1P1B2RPK0 AC009487.4-201ENST00000624969 3585 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 RNU6-692P-201ENST00000384496 107 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 RNU6-1222P-201ENST00000384615 107 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 SNORA12-201ENST00000391162 147 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 MIR1283-2-201ENST00000408621 87 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 PIGFP2-201ENST00000421400 651 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC022018.1-201ENST00000430685 241 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AL031667.1-201ENST00000440222 725 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC243964.1-201ENST00000441814 261 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AL031274.1-201ENST00000450334 232 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 C1DP4-201ENST00000455429 424 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC107222.1-201ENST00000510899 637 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 MIR514B-201ENST00000516774 80 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC023632.4-201ENST00000517783 191 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AL356057.1-201ENST00000533798 831 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC002044.1-201ENST00000606707 158 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AC008536.2-201ENST00000607284 349 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 AL773524.1-201ENST00000614065 229 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 YWHAEP7-203ENST00000622054 312 ntBASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HMGB1P1B2RPK0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 RNU4-91P-201ENST00000364778 135 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AL356057.3-201ENST00000402607 340 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AP000936.2-201ENST00000447151 681 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 RNA5SP233-201ENST00000459153 113 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 BET1P1-201ENST00000482276 359 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 SAP18P1-201ENST00000512058 390 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AC023050.3-201ENST00000541142 333 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 PRELID2P1-201ENST00000552837 301 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 MTND3P12-201ENST00000559068 328 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 MIR4443-201ENST00000585052 53 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AC025449.1-201ENST00000603896 529 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AC025754.2-201ENST00000606491 432 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AC009161.2-201ENST00000624626 138 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 AC068724.3-201ENST00000625906 87 ntBASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGB1P1B2RPK0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 RN7SKP227-201ENST00000364445 330 ntBASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 AC096664.2-201ENST00000411843 406 ntBASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 SNORD56-201ENST00000413522 71 ntBASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 AC245102.2-201ENST00000448956 180 ntBASIC2.59□□□□□ -1.99
HMGB1P1B2RPK0 AC022364.2-201ENST00000457963 554 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms