Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC011155.2-201ENST00000623202 216 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 CTSLP2-204ENST00000629029 392 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AL354685.2-201ENST00000448218 1447 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC006020.1-201ENST00000420179 1854 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 CKAP2P1-201ENST00000555477 2049 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNU4-20P-201ENST00000365601 151 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1029P-201ENST00000384109 107 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNU6-648P-201ENST00000410190 107 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1068P-201ENST00000410958 103 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AL592045.1-201ENST00000429867 352 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 MYL8P-204ENST00000431574 518 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 FABP5P13-201ENST00000452144 328 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 FABP5P15-201ENST00000453566 214 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AP000852.1-201ENST00000472460 573 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC079382.1-201ENST00000493346 557 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC116562.3-201ENST00000506136 177 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC010486.1-201ENST00000511793 424 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 SNORA31.3-201ENST00000516029 96 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNU2-10P-201ENST00000516375 211 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNA5SP281-201ENST00000516504 135 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1038P-201ENST00000516516 104 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.689-201ENST00000516589 107 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RNU6-835P-201ENST00000516974 104 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 OR5AQ1P-201ENST00000527596 927 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC068587.5-201ENST00000528506 175 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC136619.2-201ENST00000563361 631 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 MIR3199-1-201ENST00000582434 88 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 MIR4435-1-201ENST00000582552 80 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AP000907.4-201ENST00000604143 237 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AL158032.1-201ENST00000605401 106 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AP001330.5-201ENST00000607176 411 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC017083.3-201ENST00000609955 700 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 RMST_3.1-201ENST00000611651 109 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 HMGB1P24-202ENST00000615653 685 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 AC025034.2-201ENST00000623264 286 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 MAPK10-266ENST00000641066 6555 ntBASIC2.47□□□□□ -2.01
TRIM49BA6NDI0 HSPA8P4-201ENST00000511877 1920 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 SNORD115-7-201ENST00000365306 82 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 SNORA75B-201ENST00000384053 137 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RNU6-658P-201ENST00000384606 106 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 SNORA67.4-201ENST00000384688 142 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 MIR221-201ENST00000385135 110 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 CISD1P1-201ENST00000393907 327 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 ZNF90P2-204ENST00000419323 1075 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 MTCO1P20-201ENST00000425366 358 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 MICF-203ENST00000432679 129 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RBMX2P4-201ENST00000441256 376 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC016691.1-201ENST00000441321 413 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 HMGN2P10-201ENST00000448085 265 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC104435.1-201ENST00000483483 166 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RNA5SP401-201ENST00000515920 127 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RNU1-104P-201ENST00000517280 175 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC011979.2-201ENST00000527568 352 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AP003072.2-201ENST00000527756 676 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 OR4R1P-201ENST00000529879 463 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 PRELID2P1-201ENST00000552837 301 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC021739.1-201ENST00000559631 174 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 MIR4775-201ENST00000581168 75 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AC008521.1-201ENST00000587471 187 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AL354950.2-201ENST00000617939 290 ntBASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.46□□□□□ -2.02
TRIM49BA6NDI0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC093536.2-201ENST00000565257 1406 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms