Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC011005.2-201ENST00000487324 359 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 GZMAP1-201ENST00000503054 631 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MTND3P25-201ENST00000509243 135 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC091133.4-201ENST00000511142 308 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 SNORA25.11-201ENST00000515935 105 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-405P-201ENST00000516637 110 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-410P-201ENST00000517006 107 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-685P-201ENST00000517088 95 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AL121821.2-201ENST00000556081 394 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AL391840.1-201ENST00000571144 367 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MIR1273C-201ENST00000578669 77 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MTATP6P3-201ENST00000581686 676 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MIR4769-201ENST00000584126 77 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 NBR2-204ENST00000587322 63 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC073648.5-201ENST00000603502 305 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC091152.3-201ENST00000604227 325 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AL139286.2-201ENST00000606838 396 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC068792.1-201ENST00000621354 417 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MIR7515-201ENST00000637837 67 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC022336.2-201ENST00000568966 2538 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 Y_RNA.33-201ENST00000362591 102 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RNU4-24P-201ENST00000364565 139 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-108P-201ENST00000365558 107 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RNU4-52P-201ENST00000384209 138 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 Y_RNA.559-201ENST00000384686 107 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 MIR454-201ENST00000390180 115 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-1140P-201ENST00000410517 106 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 NDUFS5P4-201ENST00000412983 318 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RPL26P27-201ENST00000414397 437 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RPL21P90-201ENST00000415692 466 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 PGBD4P6-201ENST00000421501 610 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC003685.2-201ENST00000422795 395 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 MTCYBP8-201ENST00000422855 651 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 MTCO3P30-201ENST00000426425 670 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AL445646.1-201ENST00000431784 216 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 BRK1P2-201ENST00000442875 223 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RPL37P6-201ENST00000460682 294 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 EIF4EP3-201ENST00000498782 656 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC116337.1-201ENST00000509680 687 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RN7SKP298-201ENST00000515950 94 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-143P-201ENST00000516942 93 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AP003392.2-201ENST00000527269 208 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AP005435.4-201ENST00000529514 284 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC022880.1-201ENST00000534017 973 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC091805.2-201ENST00000603848 235 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC025754.2-201ENST00000606491 432 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AP001596.2-201ENST00000608410 312 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC009318.2-201ENST00000610917 651 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC004852.3-201ENST00000614131 326 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC009161.2-201ENST00000624626 138 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 ZNF680P1-201ENST00000436625 1469 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 MTND5P26-201ENST00000426018 1752 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 ADAM3A-203ENST00000461344 2157 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AC092881.1-201ENST00000638218 2733 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 AL137003.2-201ENST00000606924 2538 ntBASIC1.66□□□□□ -2.14
TRAV40A0A0B4J280 MTND4P1-201ENST00000457501 1466 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AL356292.1-201ENST00000283110 373 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1179P-201ENST00000384667 107 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.582-201ENST00000391023 95 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 FO393413.1-201ENST00000402892 195 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 CIR1P3-201ENST00000405137 479 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-193P-201ENST00000410977 107 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 HMGB3P2-201ENST00000411913 584 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 UBE2V1P10-201ENST00000414685 269 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 OR6C66P-201ENST00000414917 930 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 AL669831.1-202ENST00000428504 417 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 GTF2IP13-201ENST00000438487 386 ntBASIC1.65□□□□□ -2.15
TRAV40A0A0B4J280 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms