Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TRAV32-201ENST00000553993 340 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AC005899.2-201ENST00000584353 90 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 MIR3922-201ENST00000585192 84 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AC018462.2-201ENST00000605375 395 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AL133255.1-201ENST00000606374 441 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AL050343.2-201ENST00000607338 280 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AL133215.3-201ENST00000609801 448 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AC091953.5-201ENST00000622919 233 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AC006026.1-201ENST00000444025 1803 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 AC007496.3-201ENST00000624987 3443 ntBASIC3.56□□□□□ -1.84
PCDHGA3Q9Y5H0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 Y_RNA.813-201ENST00000364639 102 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-596P-201ENST00000365395 98 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 MIR517A-201ENST00000385001 87 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 RNY4P36-201ENST00000391116 96 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-325P-201ENST00000411132 105 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 RPS29P31-201ENST00000446147 164 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU7-187P-201ENST00000458985 68 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AC133134.1-201ENST00000466800 359 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AC008571.1-201ENST00000467232 300 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 SNORA74D-201ENST00000516404 141 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 SNORA70.24-201ENST00000517233 118 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AC009163.5-201ENST00000575421 637 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 CPDP1-201ENST00000579660 283 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 BNIP3P16-201ENST00000589779 534 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AC005046.1-201ENST00000608515 625 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 AL157817.1-201ENST00000614264 790 ntBASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA3Q9Y5H0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-858P-201ENST00000362436 107 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 Y_RNA.151-201ENST00000363566 112 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 RNA5SP139-201ENST00000364340 117 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-1011P-201ENST00000384668 107 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 RNA5SP354-201ENST00000391247 136 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AL513475.1-201ENST00000406602 315 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-1050P-201ENST00000410388 107 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AL365496.1-201ENST00000426885 215 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 CYCSP35-201ENST00000451978 304 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 MRPL42P6-201ENST00000486397 371 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AC010265.1-201ENST00000513509 211 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AC103996.1-201ENST00000555468 102 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 MIR5195-201ENST00000583555 115 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AL356157.2-201ENST00000605122 111 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AC024581.2-201ENST00000619986 252 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AC022140.2-201ENST00000623500 188 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 AL359757.2-201ENST00000624309 274 ntBASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PCDHGA3Q9Y5H0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-1188P-201ENST00000363795 107 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-105P-201ENST00000363909 104 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-19P-201ENST00000384718 107 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-750P-201ENST00000390946 107 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU4-14P-201ENST00000410858 122 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC023141.4-201ENST00000412031 328 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 PTGES3P4-201ENST00000426243 356 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 TRBV12-2-201ENST00000489763 344 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC026782.1-201ENST00000512952 449 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 RNU6-581P-201ENST00000516214 105 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 IGHV3-76-201ENST00000522465 295 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 APOOP3-201ENST00000536787 586 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC090877.1-201ENST00000561418 344 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms