Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RPS29P31-201ENST00000446147 164 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AL031274.1-201ENST00000450334 232 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 RN7SL594P-201ENST00000470590 287 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AC093303.1-201ENST00000514549 295 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-1046P-201ENST00000516538 107 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 MIR4298-201ENST00000584380 73 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AC018462.2-201ENST00000605375 395 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AL161629.2-201ENST00000615347 275 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AL049781.1-201ENST00000623195 3585 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 MTND5P10-201ENST00000603719 1809 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 SNORA33.2-201ENST00000365413 134 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 SNORA22B-201ENST00000383876 138 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-933P-201ENST00000384424 107 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-1160P-201ENST00000384546 104 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AC096664.2-201ENST00000411843 406 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 SSXP4-201ENST00000451349 245 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 MTCO3P10-201ENST00000455912 772 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 ELOCP24-201ENST00000456370 334 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 SNORD5.1-201ENST00000458800 75 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 RNU7-187P-201ENST00000458985 68 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AC026782.1-201ENST00000512952 449 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-377P-201ENST00000515965 102 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 SNORA70.18-201ENST00000516696 98 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AP000942.4-201ENST00000604811 241 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AC016925.2-201ENST00000605108 242 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AC006111.3-201ENST00000622137 383 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 AL669831.3-213ENST00000636676 183 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
PCDHB1Q9Y5F3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
PCDHB1Q9Y5F3 AC068647.1-201ENST00000489539 2265 ntBASIC3.53□□□□□ -1.85
PCDHB1Q9Y5F3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
PCDHB1Q9Y5F3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 RNU1-33P-201ENST00000364249 162 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 Z98749.2-208ENST00000381646 500 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 RNA5SP120-201ENST00000410900 112 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC113618.1-201ENST00000416747 285 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 RPL31P12-201ENST00000422587 358 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 PMCHL1-202ENST00000423102 261 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC098831.1-201ENST00000440661 216 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 RPL30P15-201ENST00000457129 321 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 snoU13.28-201ENST00000459235 104 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 snoU109.2-201ENST00000459316 135 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC090096.1-201ENST00000489168 390 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC018437.1-201ENST00000492214 406 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 RPS27AP10-201ENST00000496103 208 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC026784.1-201ENST00000507986 352 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 MTCYBP40-201ENST00000509390 1135 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AP006245.1-201ENST00000522549 120 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AP004607.1-201ENST00000524456 203 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AC006504.6-201ENST00000590142 199 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 AP000654.2-201ENST00000605633 586 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 MIR6134-201ENST00000617606 109 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 U4.7-201ENST00000638126 106 ntBASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms