Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AP005902.1-201ENST00000521358 186 ntBASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 TRAV28-201ENST00000557548 323 ntBASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 AL645944.1-201ENST00000603857 493 ntBASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 AC010733.2-201ENST00000589496 5702 ntBASIC3.91□□□□□ -1.78
PCDHB4Q9Y5E5 AC032011.1-201ENST00000611703 1549 ntBASIC3.9□□□□□ -1.78
PCDHB4Q9Y5E5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHB4Q9Y5E5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.9□□□□□ -1.78
PCDHB4Q9Y5E5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHB4Q9Y5E5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.9□□□□□ -1.78
PCDHB4Q9Y5E5 U3.6-201ENST00000363622 211 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.222-201ENST00000364264 102 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 SNORA7.2-201ENST00000364446 145 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 DEFB109C-201ENST00000382575 264 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 DEFB109B-201ENST00000382656 264 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.461-201ENST00000384263 103 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 SNORA51.11-201ENST00000384442 131 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.551-201ENST00000384661 102 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 CYCSP19-201ENST00000411715 316 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 MTND3P9-201ENST00000429526 346 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AL078601.1-201ENST00000444542 271 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC013470.1-201ENST00000453438 462 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC092798.1-201ENST00000458542 409 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-408P-201ENST00000515910 100 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC109479.2-201ENST00000517842 174 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 IGHV3-76-201ENST00000522465 295 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC125232.2-201ENST00000592457 143 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AC078899.3-201ENST00000599065 212 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 MTND4LP5-201ENST00000605152 292 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 AL359693.1-201ENST00000614959 2407 ntBASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHB4Q9Y5E5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 CEP170P1-201ENST00000502249 4587 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-428P-201ENST00000362942 107 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.214-201ENST00000364201 112 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.288-201ENST00000364854 92 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 RNU1-64P-201ENST00000365443 163 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.526-201ENST00000384572 110 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 MIR34A-201ENST00000385130 110 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 SAR1AP2-201ENST00000392696 594 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 RNU2-68P-201ENST00000410878 191 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC007098.1-201ENST00000420122 367 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 RPL17P36-201ENST00000420302 549 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 ELOCP20-201ENST00000422460 345 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AL445584.1-201ENST00000431451 330 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AP000873.1-201ENST00000463987 400 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 RNU2-53P-201ENST00000516257 147 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-612P-201ENST00000516909 102 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC005357.1-201ENST00000588399 301 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 SRGNP1-201ENST00000603392 451 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC136601.2-201ENST00000604356 474 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC006077.1-201ENST00000604746 343 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC004805.2-201ENST00000605382 482 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC008568.2-201ENST00000623862 2313 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC233263.6-201ENST00000631132 1963 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 AC007656.2-201ENST00000624902 4547 ntBASIC3.89□□□□□ -1.79
PCDHB4Q9Y5E5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 AC007785.2-201ENST00000598627 1916 ntBASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.26-201ENST00000362539 101 ntBASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 SNORD50.1-201ENST00000362987 71 ntBASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.447-201ENST00000384184 113 ntBASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.489-201ENST00000384410 101 ntBASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-700P-201ENST00000391043 107 ntBASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.88□□□□□ -1.79
PCDHB4Q9Y5E5 RN7SKP202-201ENST00000410439 330 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms