Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 PIGFP2-201ENST00000421400 651 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 MICF-203ENST00000432679 129 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 RPL36AP53-201ENST00000432891 316 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 DNAJC19P4-201ENST00000440115 345 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 SNRPGP6-201ENST00000451124 220 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC010099.1-201ENST00000455434 375 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 MTCO2P18-201ENST00000457151 658 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 MTCO2P29-201ENST00000465212 189 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC022616.6-201ENST00000520479 119 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC135279.1-201ENST00000543493 504 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC121758.2-201ENST00000553271 193 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 MIR3913-1-201ENST00000577744 102 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AL136363.1-201ENST00000605349 337 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 AC004805.2-201ENST00000605382 482 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 MIR6515-201ENST00000619843 57 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 MTND4P23-201ENST00000447723 1363 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHANK1Q9Y566 RNU4-21P-201ENST00000362802 126 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNU6-181P-201ENST00000363225 107 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNU6-1167P-201ENST00000363227 94 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNA5SP393-201ENST00000363423 117 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNU6-1027P-201ENST00000383998 107 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AL663109.1-201ENST00000411498 844 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC007919.1-201ENST00000429380 217 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RPL23AP30-201ENST00000432419 501 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC009238.1-201ENST00000442165 424 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC009237.6-201ENST00000446969 424 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RPL37P25-201ENST00000507308 276 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNU6-390P-201ENST00000516259 103 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNU6-445P-201ENST00000516949 107 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNU6-1092P-201ENST00000516955 87 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC087883.1-201ENST00000551882 391 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 MIR4528-201ENST00000577763 90 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 MIR3935-201ENST00000583472 104 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC098848.2-201ENST00000588023 330 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC006566.1-201ENST00000608943 513 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AC091304.9-201ENST00000612091 226 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 MIR6504-201ENST00000613520 61 ntBASIC1.59□□□□□ -2.15
SHANK1Q9Y566 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.59□□□□□ -2.15
SHANK1Q9Y566 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.59□□□□□ -2.15
SHANK1Q9Y566 RNU5E-1-201ENST00000362477 120 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 RNU6-533P-201ENST00000384144 107 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 RNU6-1245P-201ENST00000411130 106 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 HMGN1P14-201ENST00000412459 517 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AL109913.1-201ENST00000421173 514 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 MTCYBP5-201ENST00000423752 1135 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC119618.1-201ENST00000434191 222 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 NEFMP1-201ENST00000443423 1006 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC010631.1-201ENST00000474150 156 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 Vault.3-201ENST00000516676 95 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 RNU6-64P-201ENST00000517119 105 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 ADI1P3-201ENST00000549509 470 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC112191.3-201ENST00000604371 277 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC008945.2-201ENST00000606056 604 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.59□□□□□ -2.16
SHANK1Q9Y566 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
SHANK1Q9Y566 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC092656.1-203ENST00000624134 423 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 AC068880.5-201ENST00000624331 290 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.59□□□□□ -2.16
SHANK1Q9Y566 RNU4-24P-201ENST00000364565 139 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 RNU4-52P-201ENST00000384209 138 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 MIR518D-201ENST00000385014 87 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 MIR888-201ENST00000401186 77 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 EIF1AXP1-201ENST00000419267 435 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 CYCSP46-201ENST00000423569 204 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 MTND4P25-201ENST00000441039 533 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 MTND2P22-201ENST00000444325 1033 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 RPL12P25-201ENST00000455592 494 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.58□□□□□ -2.16
SHANK1Q9Y566 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.58□□□□□ -2.16
SHANK1Q9Y566 AC026241.1-201ENST00000517873 2142 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 AC025755.1-201ENST00000521306 278 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.58□□□□□ -2.16
SHANK1Q9Y566 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.58□□□□□ -2.16
SHANK1Q9Y566 AC007151.1-201ENST00000572774 483 ntBASIC1.58□□□□□ -2.16
SHANK1Q9Y566 RN7SKP299-201ENST00000606679 301 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms