Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RPL30P13-201ENST00000418873 348 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 SDAD1P3-201ENST00000427380 333 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC107083.1-201ENST00000439643 279 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 MTND3P1-201ENST00000441336 220 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 MTCO1P44-201ENST00000441935 243 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC108938.1-201ENST00000451204 136 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 RPS3AP14-201ENST00000483907 780 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 RNA5SP445-201ENST00000515889 115 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 SUB1P3-201ENST00000564581 315 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 MIR548AC-201ENST00000585049 88 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 DNAJC19P3-201ENST00000594491 331 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC121334.2-201ENST00000605387 271 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC144521.1-201ENST00000607148 956 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 uc_338.5-201ENST00000611839 155 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 MIR7106-201ENST00000612419 65 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 AC063943.3-201ENST00000615562 356 ntBASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHTOPQ9Y3Y2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 ZNF29P-201ENST00000225587 168 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 SNORD14B-201ENST00000364533 90 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 MIR196B-201ENST00000384852 84 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AL008629.1-201ENST00000438615 184 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 DUXAP8-207ENST00000456786 622 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC087477.1-201ENST00000465747 340 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 RPL30P1-201ENST00000488676 339 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC112206.3-201ENST00000514578 389 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC023813.2-201ENST00000564321 469 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AF131215.7-201ENST00000602443 707 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 AL136370.1-201ENST00000608166 691 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 MIR1248-201ENST00000629190 106 ntBASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
CHTOPQ9Y3Y2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 SNORA5B-201ENST00000363786 132 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 RNU6-7-201ENST00000364784 107 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 RNU6-8-201ENST00000365467 107 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 RNA5SP88-201ENST00000365560 109 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 RNU6-1176P-201ENST00000390955 107 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 MIR1294-201ENST00000408503 142 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 PIGPP2-201ENST00000411569 458 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 MTCYBP5-201ENST00000423752 1135 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 RPL30P12-201ENST00000474666 353 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AL049873.1-201ENST00000480540 376 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AC010409.1-201ENST00000487382 476 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 RN7SL636P-201ENST00000497504 294 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AC097462.2-201ENST00000504623 481 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 Y_RNA.687-201ENST00000516558 91 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 RNU7-51P-201ENST00000516560 62 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 EEF1A1P37-201ENST00000522748 715 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 MIR4319-201ENST00000577285 85 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AL158032.1-201ENST00000605401 106 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 AL121890.5-201ENST00000620848 304 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 ZNF876P-202ENST00000398732 1485 ntBASIC1.42□□□□□ -2.18
CHTOPQ9Y3Y2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 Y_RNA.46-201ENST00000362695 102 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 SNORD56.1-201ENST00000362913 68 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AC063976.3-201ENST00000426849 329 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 MTND3P3-201ENST00000505004 126 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 ANXA2P1-201ENST00000505539 926 ntBASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.41□□□□□ -2.18
CHTOPQ9Y3Y2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms