Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 HSPE1P12-201ENST00000412576 301 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 GPM6BP3-201ENST00000442797 145 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 CEACAMP4-201ENST00000457676 421 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 RN7SL354P-201ENST00000469282 294 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 RPS4XP22-201ENST00000480755 780 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 RN7SKP122-201ENST00000515923 296 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 AC006064.5-201ENST00000541782 248 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 HSPE1P7-201ENST00000604681 321 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 AP005019.3-201ENST00000620418 560 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 MIR7702-201ENST00000621931 59 ntBASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.79□□□□□ -1.8
SF3B6Q9Y3B4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AC007656.2-201ENST00000624902 4547 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 Y_RNA.65-201ENST00000362846 100 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RNU6-200P-201ENST00000364743 107 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 SNORA70F-201ENST00000384142 135 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 Y_RNA.581-201ENST00000391017 97 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RNA5SP213-201ENST00000391031 106 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RNU1-139P-201ENST00000391307 165 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RPS4XP3-201ENST00000398541 413 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 HSPE1P26-201ENST00000405341 275 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AL591034.1-201ENST00000407447 340 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RNU2-14P-201ENST00000411053 191 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AP001025.1-201ENST00000486139 332 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 RNU1-61P-201ENST00000516107 151 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 SNORA31.6-201ENST00000516241 130 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AC006199.1-201ENST00000548728 219 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AC027288.2-201ENST00000553028 243 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 UBL5P4-201ENST00000562584 236 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 HMGN2P15-201ENST00000585707 270 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AL590392.1-201ENST00000604960 446 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AL356157.2-201ENST00000605122 111 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 AL079305.1-201ENST00000623159 3008 ntBASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B6Q9Y3B4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SF3B6Q9Y3B4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 Y_RNA.277-201ENST00000364754 102 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 U8.10-201ENST00000384260 133 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 RNU1-89P-201ENST00000384592 164 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 DNAJC19P7-201ENST00000428811 344 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 WARS2P1-201ENST00000429678 537 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 SUMO1P2-201ENST00000452524 304 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AC006463.2-201ENST00000473326 348 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 RN7SL812P-201ENST00000493791 279 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 RPL31P61-201ENST00000496160 376 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 ACA59.2-201ENST00000517061 156 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 MIR5571-201ENST00000577998 113 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 MIR5695-201ENST00000579717 85 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 MIR3609-201ENST00000582661 80 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AC079587.1-201ENST00000603846 277 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AC005296.1-201ENST00000616145 209 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AC048347.1-201ENST00000624621 427 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 AC110491.1-201ENST00000562191 2010 ntBASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.77□□□□□ -1.81
SF3B6Q9Y3B4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SF3B6Q9Y3B4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SF3B6Q9Y3B4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SF3B6Q9Y3B4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.76□□□□□ -1.81
SF3B6Q9Y3B4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 447.3 ms