Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 FARSBP1-201ENST00000435808 1778 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF6Q9Y252 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF6Q9Y252 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RNF6Q9Y252 SNORD14B-201ENST00000364533 90 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 RNU6-297P-201ENST00000384636 107 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 Y_RNA.576-201ENST00000384781 102 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RNF6Q9Y252 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RNF6Q9Y252 AL049545.1-201ENST00000401856 572 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 MTND1P23-201ENST00000416931 372 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AL353621.1-201ENST00000418219 243 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC003685.2-201ENST00000422795 395 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC009961.2-201ENST00000435771 251 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 MED28P2-201ENST00000475771 317 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 BET1P1-201ENST00000482276 359 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 MTAPP1-201ENST00000489154 819 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC092436.1-201ENST00000506450 503 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC104806.1-201ENST00000508720 308 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC026436.1-201ENST00000510537 270 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 RNU6-410P-201ENST00000517006 107 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC090572.1-201ENST00000519251 160 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 OR5AQ1P-201ENST00000527596 927 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC079598.5-201ENST00000547460 117 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC121758.2-201ENST00000553271 193 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 MTCYBP33-201ENST00000575007 1130 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 MIR1273D-201ENST00000577266 86 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 Z84480.1-201ENST00000605131 311 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC103810.6-201ENST00000606708 136 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC096772.1-201ENST00000609146 564 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC093788.1-201ENST00000609356 927 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 MIR5739-201ENST00000619803 80 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC024581.2-201ENST00000619986 252 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 AC093648.1-201ENST00000623546 606 ntBASIC2.13□□□□□ -2.07
RNF6Q9Y252 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
RNF6Q9Y252 RBBP8P1-201ENST00000449447 1844 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RNF6Q9Y252 SNORD114-19-201ENST00000363072 75 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 SNORA62.1-201ENST00000364287 154 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 RNU6-72P-201ENST00000384285 79 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 BTF3P7-201ENST00000407097 488 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 RN7SKP158-201ENST00000410453 326 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 RNU6-1140P-201ENST00000410517 106 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AL031779.1-201ENST00000415663 330 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 MORF4L1P6-201ENST00000418771 268 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC092447.3-201ENST00000426027 686 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 GPR143P-201ENST00000434155 205 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RNF6Q9Y252 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 MTCYBP1-201ENST00000454315 1119 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 RNA5SP269-201ENST00000459032 137 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RNF6Q9Y252 HMGB1P30-201ENST00000492455 606 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC098862.1-201ENST00000504991 413 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AF213884.2-201ENST00000510417 903 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 Y_RNA.687-201ENST00000516558 91 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AP004607.1-201ENST00000524456 203 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 MIR5692A1-201ENST00000580523 69 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 MIR4769-201ENST00000584126 77 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 RPS15AP11-201ENST00000594193 385 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 BNIP3P30-201ENST00000601184 574 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AL138889.2-201ENST00000603883 242 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AL355297.2-201ENST00000604792 129 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 BNIP3P10-201ENST00000605360 577 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 MIR1291-201ENST00000627649 87 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.12□□□□□ -2.07
RNF6Q9Y252 AC016717.2-201ENST00000609089 5141 ntBASIC2.12□□□□□ -2.07
RNF6Q9Y252 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RNF6Q9Y252 UBE2V1P10-201ENST00000414685 269 ntBASIC2.11□□□□□ -2.07
RNF6Q9Y252 AC107081.1-201ENST00000414975 361 ntBASIC2.11□□□□□ -2.07
RNF6Q9Y252 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.11□□□□□ -2.07
RNF6Q9Y252 AC000111.3-201ENST00000433478 193 ntBASIC2.11□□□□□ -2.07
RNF6Q9Y252 CALM1P1-201ENST00000442082 433 ntBASIC2.11□□□□□ -2.07
RNF6Q9Y252 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.11□□□□□ -2.07
RNF6Q9Y252 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.11□□□□□ -2.07
RNF6Q9Y252 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.11□□□□□ -2.07
RNF6Q9Y252 SNORD42A-201ENST00000459584 64 ntBASIC2.11□□□□□ -2.07
RNF6Q9Y252 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.11□□□□□ -2.07
RNF6Q9Y252 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.11□□□□□ -2.07
RNF6Q9Y252 AC018437.1-201ENST00000492214 406 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms