Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU6-137P-201ENST00000363680 108 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 Y_RNA.275-201ENST00000364726 110 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 Y_RNA.570-201ENST00000384750 101 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 FTH1P15-201ENST00000406984 280 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 VDAC1P3-201ENST00000434069 851 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 RN7SL691P-201ENST00000494487 301 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 AC005921.1-201ENST00000510589 286 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 RNU1-45P-201ENST00000517191 141 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 MIR5571-201ENST00000577998 113 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 AC072026.1-201ENST00000605023 201 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 AL138963.2-201ENST00000605137 226 ntBASIC4.8□□□□□ -1.64
NOD1Q9Y239 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NOD1Q9Y239 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NOD1Q9Y239 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NOD1Q9Y239 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC104260.2-201ENST00000623551 3497 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNU1-14P-201ENST00000362759 152 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNU6-961P-201ENST00000363893 105 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNA5SP189-201ENST00000364920 115 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNA5SP167-201ENST00000365461 116 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNU1-63P-201ENST00000383902 164 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNU6-1145P-201ENST00000384246 107 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 MIR329-1-201ENST00000385028 80 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 AL390729.2-201ENST00000416137 156 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AL356095.1-201ENST00000417217 199 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AL645939.1-201ENST00000453429 797 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RPL35AP15-201ENST00000468042 339 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RPS4XP22-201ENST00000480755 780 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC020890.1-201ENST00000491837 504 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 AL592156.1-201ENST00000508758 304 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNU6-1278P-201ENST00000516130 107 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RNU6-1198P-201ENST00000516904 67 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 RPL21P7-201ENST00000557463 483 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC008749.1-201ENST00000597650 306 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 MIR6867-201ENST00000610636 67 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 MIR6875-201ENST00000617506 72 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC091905.2-201ENST00000623143 306 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 IGHVIII-44-202ENST00000636235 289 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 AC132825.6-201ENST00000638861 357 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 MAPK10-303ENST00000641324 3959 ntBASIC4.79□□□□□ -1.64
NOD1Q9Y239 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.79□□□□□ -1.64
NOD1Q9Y239 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NOD1Q9Y239 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NOD1Q9Y239 Y_RNA.418-201ENST00000384029 102 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 MIR888-201ENST00000401186 77 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 RPL21P65-201ENST00000406094 466 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 AC091959.1-201ENST00000495857 238 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 AC016632.1-201ENST00000503994 196 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 AC023141.12-201ENST00000512399 199 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 AL391261.3-201ENST00000557194 520 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 MIR4282-201ENST00000583613 67 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 FAM27D1-201ENST00000612308 341 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NOD1Q9Y239 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NOD1Q9Y239 AC022336.2-201ENST00000568966 2538 ntBASIC4.78□□□□□ -1.64
NOD1Q9Y239 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
NOD1Q9Y239 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.77□□□□□ -1.65
NOD1Q9Y239 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NOD1Q9Y239 MIR410-201ENST00000362222 80 ntBASIC4.77□□□□□ -1.65
NOD1Q9Y239 RNU6-50P-201ENST00000362356 103 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms